Input parameters:
Query = ENSP00000375872 (Len=607)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000375872, Len=607):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPNRHEISPGHDGTWNDN 80
WD40-rpts
Query 81 QLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRKDREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQ 160
WD40-rpts
Query 161 TLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI 240
WD40-rpts
Query 241 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDA 320
WD40-rpts (________
Query 321 HDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRL 400
WD40-rpts _________WD 1________________) (_________________WD 2________________) (__
Query 401 RHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES 480
WD40-rpts _______________WD 3________________) (_______________WD 4_______________) (__
Query 481 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYI 560
WD40-rpts _______________WD 5________________) (___________________WD 6_________________
Query 561 WSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY 607
WD40-rpts _) (_________________WD 7_________________)
7 WD40-repeats found in QUERY=ENSP00000375872 (Len=607):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 312-350 8.50 465.77 3.3e-05 27.5% 48.48
WD 2: Seg 6 356-394 9.18 493.97 1.4e-05 32.5% 52.87
WD 3: Seg 10 398-436 10.50 548.59 2.5e-06 45.0% 53.25
WD 4: Seg 14 440-475 6.60 387.12 0.00038 22.5% 46.63
WD 5: Seg 18 478-516 7.40 420.49 0.00013 25.0% 52.59
WD 6: Seg 22 520-562 8.12 450.04 5.3e-05 35.0% 53.93
WD 7: Seg 26 566-605 8.25 455.62 4.5e-05 30.0% 49.40
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 312-350 ----ATALCVFD-AHD----GEVNAVQFSPGSRLLATGGMDRRVKLWE
WD 2 356-394 CEFK----GSLS-GSN----AGITSIEFDSAGSYLLAASNDFASRIWT
WD 3 398-436 YRLR----HTLT-GHS----GKVLSAKFLLDNARIVSGSHDRTLKLWD
WD 4 440-475 KVCI----KTVF-AGS----S---CNDIVCTEQCVMSGHFDKKIRFWD
WD 5 478-516 SESI----VREM-ELL----GKITALDLNPERTELLSCSRDDLLKVID
WD 6 520-562 NAIK----QTFS-APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWS
WD 7 566-605 GKVE----KVLSKQHS----SSINAVAWSPSGSHVVSVDKGCKAVLWA
WD40 Template GECL----RTLS-GHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD