Input parameters:
Query = ENSP00000373430 (Len=96)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000373430, Len=96):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLA 80
WD40-rpts (____________________________WD 1_____________
Query 81 TVLSGACDGELNMIKL 96
WD40-rpts ______________)
1 WD40-repeats found in QUERY=ENSP00000373430 (Len=96):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 35-95 4.51 301.04 0.00545 27.5% 38.58
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 35-95 FEVPREYIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGELNMIK
WD40 Template GEC-------------------LR--TLSGHTSGVTSVSFSPDG-KRLVSGSEDGTIKVWD