Input parameters:
Query = ENSP00000372513 (Len=371)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000372513, Len=371):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MFQEVKADKVTMLWNKKATAVLVIASTDVDKTGASYYGEQTLHYIATNGESAVVQLPKNGPIYDVVWNSSSTEFCAVYGF 80
WD40-rpts (_________________WD 1___________
Query 81 MPAKATIFNLKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHILT 160
WD40-rpts ______) (__________________WD 2__________________)(_________________WD 3_______
Query 161 ATCAPRLRVNNGYKIWHYTGSILHKYDVPSNAELWQVSWQPFLDGIFPAKTITYQAVPSEVPNEEPKVATAYRPPALRNK 240
WD40-rpts __________)
Query 241 PITNSKLHEEEPPQNMKPQSGNDKPLSKTALKNQRKHEAKKAAKQEARSDKSPDLAPTPAPQSTPRNTVSQSISGDPEID 320
WD40-rpts
Query 321 KKIKNLKKKLKAIEQLKEQAATGKQLEKNQLEKIQKETALLQELEDLELGI 371
WD40-rpts
3 WD40-repeats found in QUERY=ENSP00000372513 (Len=371):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 6 48-87 3.61 263.64 0.01730 10.0% 50.21
WD 2: Seg 10 90-131 3.54 260.74 0.01891 30.0% 36.54
WD 3: Seg 14 132-171 3.62 264.32 0.01694 15.0% 49.58
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 48-87 NGESAVVQLPKNGPIYDVVWNSSSTEFCA---VYGFMPAKATI
WD 2 90-131 -LKCDPVFDFGTGPRNAAYYSPHGHILVLAGFGNLRGQMEVWD
WD 3 132-171 VKNYKLISKPVASDSTYFAWCPDGEHILT---ATCAPRLRVNN
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVS---GSEDGTIKVWD