Input parameters:
Query = ENSP00000369425 (Len=410)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000369425, Len=410):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKI 80
WD40-rpts (_______________WD 1______________)
Query 81 ECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 160
WD40-rpts (_____________WD 2_____________) (_________________WD 3_______
Query 161 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 240
WD40-rpts __________) (__________________WD 4_________________) (____________
Query 241 VNCLSFNPYSEFILATGSADKVCDSFLVSVCQEMKSRDSSVKLYQTRGSTIEKNVLYVVLHGDAHRVHWSPHNETILASS 320
WD40-rpts _____WD 5_________________) (_________________WD 6________
Query 321 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDV 400
WD40-rpts _________) (_________________WD 7_________________)
Query 401 TTSELEGQGS 410
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000369425 (Len=410):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 37-71 3.05 240.80 0.03484 15.0% 8.44
WD 2: Seg 5 87-118 3.96 278.43 0.01096 12.5% 45.67
WD 3: Seg 8 132-171 6.07 365.53 0.00074 27.5% 51.16
WD 4: Seg 12 181-221 8.11 449.81 5.4e-05 22.5% 44.43
WD 5: Seg 15 228-267 6.88 398.66 0.00026 25.0% 48.96
WD 6: Seg 20 291-330 6.38 378.37 0.00050 25.0% 51.99
WD 7: Seg 24 348-387 6.07 365.33 0.00074 30.0% 55.56
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 37-71 TSDEQNHLV-----VARVHIPND-DA-Q-F-DASHCDSDKGEFG
WD 2 87-118 ---------NHEGEVNRARYMPQ-NP-H-IIATKTPSSDVLVFD
WD 3 132-171 -CNPDLRLRGHQKEGYGLSWNSNLSG-H-L-LSASDDHTVCLWD
WD 4 181-221 IVDAKAIFTGHSAVVEDVAWHLL-HE-S-LFGSVADDQKLMIWD
WD 5 228-267 -SKPSHLVDAHTAEVNCLSFNPY-SEFI-L-ATGSADKVCDSFL
WD 6 291-330 -IEKNVLYVVLHGDAHRVHWSPH-NE-TIL-ASSGTDRRLNVWD
WD 7 348-387 -PELLFIHGGHTAKISDFSWNPN-EPWV-I-CSVSEDNIMQIWQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-GK-R-L-VSGSEDGTIKVWD