Input parameters:
Query = ENSP00000369188 (Len=138)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000369188, Len=138):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGNKQTVFTHEQLEAYQDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLE 80
WD40-rpts (________________________________________________________________WD 1___________
Query 81 QTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLSTFHIRI 138
WD40-rpts _____________________________________________________)
1 WD40-repeats found in QUERY=ENSP00000369188 (Len=138):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-134 3.47 257.92 0.02063 25.0% -13.69
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-134 MGNKQTVFTHEQLEAYQDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLSTF
WD40 Template TGECLRTLS-------------------------GHTS-----------GVTSV------------SFSPDGKRL---------------VS----------------GSEDGTIK----------VWD-----