Input parameters:
Query = ENSP00000368809 (Len=1202)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000368809, Len=1202):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEGVYSELHSVVAEVGVPVSVSH 80
WD40-rpts (__________________WD 1__________________) (___________
Query 81 FDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHS 160
WD40-rpts ___WD 2_____________)
Query 161 LLLTDSSTLLVGGLQNHIIEIDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS 240
WD40-rpts (________________WD 3_______________) (______________
Query 241 DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANP 320
WD40-rpts ______WD 4____________________) (
Query 321 ADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPV 400
WD40-rpts _________________WD 5________________)
Query 401 PLTTDTLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE 480
WD40-rpts
Query 481 EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACEL 560
WD40-rpts
Query 561 GFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQELEIPQAYRGA 640
WD40-rpts
Query 641 GGSSFCSSGDSVIGQLFSCEMENCSLCRCGSETVRASSTLLFTLSYPDGSKSDKTGKNYDFAQVLKRSICLDQNTQAWCD 720
WD40-rpts
Query 721 TCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALADWKELGSPEGVLVCPS 800
WD40-rpts
Query 801 IEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQ 880
WD40-rpts
Query 881 RKEGVTHQQWYLFNDFLIEPIDKHEAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTF 960
WD40-rpts
Query 961 IPLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLT 1040
WD40-rpts
Query 1041 QYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFL 1120
WD40-rpts
Query 1121 AWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVL 1200
WD40-rpts
Query 1201 AL 1202
WD40-rpts
5 WD40-repeats found in QUERY=ENSP00000368809 (Len=1202):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 18-59 2.91 234.83 0.04179 17.5% 8.72
WD 2: Seg 3 69-101 2.98 237.58 0.03844 15.0% 43.41
WD 3: Seg 14 186-222 3.06 241.07 0.03456 17.5% 51.41
WD 4: Seg 18 226-271 3.26 249.13 0.02701 15.0% 31.39
WD 5: Seg 25 320-358 4.12 284.73 0.00903 12.5% 47.92
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 18-59 HSALDPVLDAHLNPSLLQNVELDPE-------GVALEALPVQESVHIME
WD 2 69-101 -------VAEVG--VPVSVSHFDLH-------EEMLWVGSHGGHATSFF
WD 3 186-222 -VQETQKYAVET--PGVTIMR--QT-------NRFFFCGHTSGKVSLRD
WD 4 226-271 -FKVEHEFDAFS--GSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYD
WD 5 320-358 -PADIFHVNPVG--PLLMTFDVSAS-------KQALAFGDSEGCVHLWT
WD40 Template TGECLRTLSGHT--SGVTSVSFSPD-------GKRLVSGSEDGTIKVWD