Input parameters:
Query = ENSP00000368513 (Len=731)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000368513, Len=731):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDEQAGPGVFFSNNHPGAGGAKGLGPLAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKGQE 80
WD40-rpts
Query 81 NLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYT 160
WD40-rpts
Query 161 DTILDVKSKRVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESAAADFSDEDEDDD 240
WD40-rpts
Query 241 VDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNESRSAGDGTDWGPNRSKLQDMLANLRDVDELPS 320
WD40-rpts
Query 321 LQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESELGLGELAGLTVANEADSLTYDIANNKDAL 400
WD40-rpts (__________________WD 1______________
Query 401 RKTWNPKFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGE 480
WD40-rpts ____)________________WD 2________________) (_______________WD 3
Query 481 QCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFN 560
WD40-rpts ______________) (_________________WD 4________________) (________
Query 561 DTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIK 640
WD40-rpts ___________WD 5__________________) (_________________WD 6______________
Query 641 FYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIAS 720
WD40-rpts __) (_________________WD 7________________) (___________________WD 8________
Query 721 AGADALAKVFV 731
WD40-rpts __________)
8 WD40-repeats found in QUERY=ENSP00000368513 (Len=731):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 364-405 7.01 404.16 0.00022 20.0% 39.96
WD 2: Seg 7 404-442 9.20 494.66 1.3e-05 32.5% 46.35
WD 3: Seg 10 461-495 8.40 461.81 3.7e-05 30.0% 48.53
WD 4: Seg 13 510-548 8.91 482.81 1.9e-05 35.0% 47.40
WD 5: Seg 16 552-594 5.83 355.60 0.00100 12.5% 45.73
WD 6: Seg 21 605-643 6.84 397.37 0.00027 20.0% 41.60
WD 7: Seg 24 647-685 10.12 532.56 4.1e-06 35.0% 56.12
WD 8: Seg 28 689-731 6.90 399.74 0.00026 22.5% 49.40
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 364-405 ADEALESELGLGE----LAGLTVAN----EADSLTYDIANNKDALRKTWN
WD 2 404-442 -WNPKFTL--RSH----FDGIRALA----FHPIEPVLITASEDHTLKMWN
WD 3 461-495 -----YTF--RAH----KGPVLCVV----MSSNGEQCYSGGTDGLIQGWN
WD 4 510-548 -SVLRGPL--LGH----TDAVWGLA----YSAAHQRLLSCSADGTLRLWN
WD 5 552-594 -VAPALSV--FND----TKELGIPASVDLVSSDPSHMVASFSKGYTSIFN
WD 6 605-643 ESN-VDTT--ANS----SCQINRVI----SHPTLPISITAHEDRHIKFYD
WD 7 647-685 -GKLIHSM--VAH----LEAVTSLA----VDPNGLYLMSGSHDCSIRLWN
WD 8 689-731 -KTCIQEF--TAHRKKFEESIHDVA----FHPSKCYIASAGADALAKVFV
WD40 Template TGECLRTL--SGH----TSGVTSVS----FSPDGKRLVSGSEDGTIKVWD