Input parameters:
Query = ENSP00000368327 (Len=194)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000368327, Len=194):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDQNLNFFSVSSDGRIVSWTLVKRKLVHIDVIKLKVEGSTTEVPEGLQLHPVGCGTAFDFHKEIDYMFLVGTEEGKIYKC 80
WD40-rpts
Query 81 SKSYSSQFLDTYDAHNMSVDTVSWNPYHTKVFMSCSSDWTVKIWDHTIKTPMFIYDLNSAVGDVAWAPYSSTVFAAVTTD 160
WD40-rpts (_________________WD 1_________________)(__________________WD 2____________
Query 161 GKEKKGQEVQKGPAVEIAKLDKLLNLVREVKIKT 194
WD40-rpts ______)
2 WD40-repeats found in QUERY=ENSP00000368327 (Len=194):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 7 86-125 5.48 341.18 0.00157 37.5% 48.56
WD 2: Seg 11 126-167 2.92 235.09 0.04146 17.5% 50.44
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 86-125 -S-QFLDTYDAHNMSVDTVSWNPYHTKVF-MSCSSDWTVKIWD
WD 2 126-167 HTIKTPMFIYDLNSAVGDVAWAP-YSSTVFAAVTTDGKEKKGQ
WD40 Template TG-ECLRTLSGHTSGVTSVSFSP-DGKRL-VSGSEDGTIKVWD