Input parameters:
Query = ENSP00000367866 (Len=363)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000367866, Len=363):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAPKKRPETQKTSEIVLRPRNKRSRSPLELEPEAKKLCAKGSGPSRRCDSDCLWVGLAGPQILPPCRSIVRTLHQHKLGR 80
WD40-rpts (_________________WD 1_________________)
Query 81 ASWPSVQQIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN 160
WD40-rpts (_________________WD 2_________________)(___________________WD 3_______________
Query 161 VILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 240
WD40-rpts ____) (_________________WD 4_________________)(____________________WD 5________
Query 241 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 320
WD40-rpts ___________) (______________________WD 6______________________) (____
Query 321 QLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQEEARTRK 363
WD40-rpts _____________WD 7_________________)
7 WD40-repeats found in QUERY=ENSP00000367866 (Len=363):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 11-50 7.45 422.25 0.00013 7.5% 46.69
WD 2: Seg 7 82-121 7.40 420.20 0.00014 20.0% 52.10
WD 3: Seg 11 122-165 6.70 391.38 0.00033 12.5% 48.94
WD 4: Seg 15 168-207 8.70 474.04 2.5e-05 37.5% 56.40
WD 5: Seg 19 208-252 8.80 478.04 2.2e-05 27.5% 49.04
WD 6: Seg 24 263-312 4.92 317.87 0.00323 20.0% 48.35
WD 7: Seg 28 316-355 5.67 348.74 0.00124 30.0% 54.74
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 11-50 KT---------S-----EIVLR-PRNKRSRSPL-ELEP-EAK-KLCAKG-SGPSRRCDS
WD 2 82-121 -S---------W-----PSVQQ-IGAGGSITGL-KFNPLNTN-QFYASS-MEGTTRLQD
WD 3 122-165 FK-----GNILR-----VFASS-DTINIWFCSL-DVSA-SSR-MVVTGD-NVGNVILLN
WD 4 168-207 -G---------K-----ELWNL-RMHKKKVTHV-ALNP-CCDWFLATAS-VDQTVKIWD
WD 5 208-252 LR---------QVRGKASFLYS-LPHRHPVNAA-CFSP-DGA-RLLTTD-QKSEIRVYS
WD 6 263-312 IPHPHRHFQHLT-----PIKAA-WHPRYNLIVV-GRYP-DPN-FKSCTPYELRTIDVFD
WD 7 316-355 -G---------K-----MMCQLYDPESSGISSLNEFNP-MGD-TLASAM--GYHILIWS
WD40 Template TG---------E-----CLRTL-SGHTSGVTSV-SFSP-DGK-RLVSGS-EDGTIKVWD