Input parameters:
Query = ENSP00000367863 (Len=238)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000367863, Len=238):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAPKKRPETQKTSEIVLRPRNKRSRSPLELEPEAKKLCAKGSGPSRRCDSDCLWVGLAGPQILPPCRSIVRTLHQHKLGR 80
WD40-rpts
Query 81 ASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGAAWHPRYN 160
WD40-rpts (______________WD 1_____________) (________________
Query 161 LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQEEARTRK 238
WD40-rpts ___WD 2___________________)
2 WD40-repeats found in QUERY=ENSP00000367863 (Len=238):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 108-140 5.66 348.39 0.00126 20.0% 33.24
WD 2: Seg 5 144-187 4.18 287.17 0.00837 20.0% 17.39
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 108-140 -------APFD----RRATSLAWHPTHPSTVAVGSKG-GDIMLWN
WD 2 144-187 KDKPTFIKGAAWHPRYNLIVVGRYPD-PNFKSCTPYELRTIDVFD
WD40 Template GECLRTLSGHT----SGVTSVSFSPD-GKRLVSGSED-GTIKVWD