Input parameters:
Query = ENSP00000367789 (Len=129)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000367789, Len=129):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGDLSLLFHFQKVESYLHQEVQTHR 80
WD40-rpts (_________________WD 1_________________) (_______________WD 2_______________
Query 81 SYYGGLTLMNCIVKVLPKEISKDYILIHHHIFLISTQEHHIPMRKKLRL 129
WD40-rpts )
2 WD40-repeats found in QUERY=ENSP00000367789 (Len=129):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-42 10.94 566.45 1.4e-06 50.0% 54.82
WD 2: Seg 5 46-81 5.94 359.92 0.00088 12.5% 37.56
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-42 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD
WD 2 46-81 -KQCVNNFSDS---VGDLSLLFHFQKVESYLHQEVQTHRS
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD