Input parameters:

  Query = ENSP00000366953 (Len=559)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000366953, Len=559):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFPFGPHSPGGDGSAGAGAEEPTPHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESS 80  
WD40-rpts                                                                                      

Query       81 TASAPGEPSPPSPPCRRPGPDCRAKSRGRHGLGAGLGGPGARLFGWLKERSLGRGLFVDPARDNFRTMTSLYGSIHPADS 160 
WD40-rpts                              (____________________WD 1____________________)       (__

Query      161 VYLSTRTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLR 240 
WD40-rpts      _______________WD 2________________)   (_________________WD 3________________)  

Query      241 KLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRYTEDGCPHKKFFHTRFLMRMRLTPDCSKMLISTSSG 320 
WD40-rpts        (_________________WD 4________________)      (_________________WD 5___________

Query      321 YLLILHDLDLTKSLEVGSYPILRARRTTSSSDLTTSSSSSGPRVSGSPCHHSDSNSSEKHMSRASQREGVSPRNSLEVVT 400 
WD40-rpts      ______)(_________________WD 6________________)                              (___

Query      401 PEVLGESDHGNCITSLQLHPKGWATLLRCSSNSDDEECTCVYEFQEGAPVRPVSPRCSLRLTHYIEEANVGRGYIKELCF 480 
WD40-rpts      __________________WD 7____________________)                        (____________

Query      481 SPDGRMISSPHGYGIRLLGFDKQCSELVDCLPKEASPLRVIRSLYSHNDVVLTTKFSPTHCQIASGCLSGRVSLYQPKF 559 
WD40-rpts      ______WD 8__________________)        (_________________WD 9________________)   

9 WD40-repeats found in QUERY=ENSP00000366953 (Len=559):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   105-150      3.76  270.13  0.01416       12.5%     34.49
  WD 2:  Seg  5   158-196      8.50  465.58  3.3e-05       20.0%     53.66
  WD 3:  Seg  9   200-238      6.74  393.15  0.00031       32.5%     51.22
  WD 4:  Seg 13   243-281      9.54  508.80  8.6e-06       32.5%     54.89
  WD 5:  Seg 17   288-327      7.22  412.88  0.00017       25.0%     49.86
  WD 6:  Seg 21   328-366      7.05  406.00  0.00021       10.0%     38.59
  WD 7:  Seg 25   397-443      6.46  381.35  0.00045       17.5%     38.45
  WD 8:  Seg 30   468-509      5.08  324.41  0.00264       20.0%     40.55
  WD 9:  Seg 34   518-556      8.57  468.72  3.0e-05       25.0%     51.11

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  105-150    KS--RGRHGLGAGLGGPGARLFGWLKERSLGR-----GLFVD---------PARDNFRTMTS
   WD 2  158-196    -A--DSVYLST------RTHGAVFNLEYSPDG-----SVLTV---------ACEQTEVLLFD
   WD 3  200-238    -S--KHIKTLS-----EAHEDCVNNIRFL-DN-----RLFAT---------CSDDTTIALWD
   WD 4  243-281    -N--TKVCTLH------GHTSWVKNIEYDTNT-----RLLVT---------SGFDGNVIIWD
   WD 5  288-327    -D--GCPHKKF------FHTRFLMRMRLTPDC----SKMLIS---------TSSGYLLILHD
   WD 6  328-366    -L--DLTKSLE------VGSYPILRARRTTSS-----SDLTT---------SSSSSGPRVSG
   WD 7  397-443    EVVTPEVLGES------DHGNCITSLQLHPKGWATLLRCSSN---------SDDEECTCVYE
   WD 8  468-509    ---------AN------VGRGYIKELCFSPDG-----RMISSPHGYGIRLLGFDKQCSELVD
   WD 9  518-556    -L--RVIRSLY------SHNDVVLTTKFSPTH-----CQIAS---------GCLSGRVSLYQ

   WD40 Template    TG--ECLRTLS------GHTSGVTSVSFSPDG-----KRLVS---------GSEDGTIKVWD