Input parameters:
Query = ENSP00000365720 (Len=805)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000365720, Len=805):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIE 80
WD40-rpts
Query 81 MHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPAI 160
WD40-rpts
Query 161 PPIGSSAGLLALSSALGGQSHLPIKDEKKHHDNDHQRDRDSIKSSSVSPSASFRGAEKHRNSADYSSESKKQKTEEKEIA 240
WD40-rpts
Query 241 ARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENGLDKTRLLKKDAPISPASIASSSSTPSSKSKELSLKRDMGKLS 320
WD40-rpts
Query 321 ETRLSEDEQCTLGLQRWFCRLWFMNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVPGKPPGVDPLASSLRTPMAVPC 400
WD40-rpts
Query 401 PYPTPFGIVPHAGMNGELTSPGAAYAGLHNISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPA 480
WD40-rpts (_______________
Query 481 YSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLD 560
WD40-rpts ___WD 1__________________) (________________WD 2________________)(_____________
Query 561 CLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 640
WD40-rpts ________WD 3____________________) (_________________WD 4________________)
Query 641 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLH 720
WD40-rpts (_________________WD 5________________) (_______________WD 6_______________)
Query 721 VTKPDKYQLHLHESCVLSLKFAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 800
WD40-rpts (__________________WD 7_________________)(__________________WD 8________________
Query 801 YEVIY 805
WD40-rpts _)
8 WD40-repeats found in QUERY=ENSP00000365720 (Len=805):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 465-506 3.54 260.79 0.01888 15.0% 18.87
WD 2: Seg 7 509-546 6.26 373.38 0.00058 25.0% 52.72
WD 3: Seg 11 547-593 7.72 433.53 8.9e-05 25.0% 48.39
WD 4: Seg 14 599-637 8.62 470.63 2.8e-05 30.0% 56.62
WD 5: Seg 18 641-679 10.01 528.24 4.7e-06 35.0% 54.18
WD 6: Seg 22 685-720 6.65 389.42 0.00035 22.5% 45.35
WD 7: Seg 25 721-761 8.35 459.63 4.0e-05 30.0% 54.49
WD 8: Seg 29 762-802 7.56 427.06 0.00011 32.5% 53.75
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 465-506 PAI-------PPNLTGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGI
WD 2 509-546 -HA-------RQINTLN-HGEVVCAVTISNPTRHVYTG-G-KGCVKVWD
WD 3 547-593 ISHPGNKSPVSQLDCLN-RDNYIRSCRLLPDGRTLIVG-GEASTLSIWD
WD 4 599-637 -PR-------IKAELTS-SAPACYALAISPDSKVCFSC-CSDGNIAVWD
WD 5 641-679 -QT-------LVRQFQG-HTDGASCIDISNDGTKLWTG-GLDNTVRSWD
WD 6 685-720 QLQ-------QH----D-FTSQIFSLGYCPTGEWLAVG-MENSNVEVLH
WD 7 721-761 VTK------PDKYQLHL-HESCVLSLKFAHCGKWFVST-GKDNLLNAWR
WD 8 762-802 TPY------GASIFQSK-ESSSVLSCDISVDDKYIVTG-SGDKKATVYE
WD40 Template TGE-------CLRTLSG-HTSGVTSVSFSPDGKRLVSG-SEDGTIKVWD