Input parameters:
Query = ENSP00000365717 (Len=805)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000365717, Len=805):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIE 80
WD40-rpts
Query 81 MHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPAI 160
WD40-rpts
Query 161 PPIGSSAGLLALSSALGGQSHLPIKDEKKHHDNDHQRERDKLNHKSLSPSASFRGAEKHRNSADYSSESKKQKTEEKEIA 240
WD40-rpts
Query 241 ARYDSDGEKSDDNLVVDVSNEDPSSPRGSPAHSPRENGLDKTRLLKKDAPISPASIASSSSTPSSKSKELSLKRDMGKLS 320
WD40-rpts
Query 321 ETRLSEDEQCTLGLQRWFCRLWFMNEKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVPGKPPGVDPLASSLRTPMAVPC 400
WD40-rpts
Query 401 PYPTPFGIVPHAGMNGELTSPGAAYAGLHNISPQMSAAAAAAAAAAAYGRSPVVGFDPHHHMRVPAIPPNLTGIPGGKPA 480
WD40-rpts
Query 481 YSFHVSADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLD 560
WD40-rpts (____________________WD 1____________________)(_____________
Query 561 CLNRDNYIRSCRLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 640
WD40-rpts ________WD 2____________________) (_________________WD 3________________)
Query 641 QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLH 720
WD40-rpts (_________________WD 4________________)(__________________WD 5_________________)
Query 721 VTKPDKYQLHLHESCVLSLKFAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 800
WD40-rpts (__________________WD 6_________________)(__________________WD 7________________
Query 801 YEVIY 805
WD40-rpts _)
7 WD40-repeats found in QUERY=ENSP00000365717 (Len=805):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 7 501-546 5.97 361.34 0.00084 25.0% 48.31
WD 2: Seg 11 547-593 7.42 421.37 0.00013 25.0% 48.79
WD 3: Seg 14 599-637 8.47 464.45 3.4e-05 30.0% 55.94
WD 4: Seg 18 641-679 9.87 522.30 5.7e-06 35.0% 53.73
WD 5: Seg 22 680-720 6.74 392.98 0.00031 25.0% 48.38
WD 6: Seg 25 721-761 8.20 453.32 4.8e-05 30.0% 54.38
WD 7: Seg 29 762-802 7.50 424.67 0.00012 32.5% 54.66
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 501-546 LIG-------PGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD
WD 2 547-593 ISHPGNKSPVS-------QLDCL-NRDNYIRSCRLLPDGRTLIVGGEASTLSIWD
WD 3 599-637 -PR-------I-------KAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWD
WD 4 641-679 -QT-------L-------VRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWD
WD 5 680-720 LRE-------G-------RQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEVLH
WD 6 721-761 VTK------PD-------KYQLH-LHESCVLSLKFAHCGKWFVSTGKDNLLNAWR
WD 7 762-802 TPY------GA-------SIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE
WD40 Template TGE-------C-------LRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD