Input parameters:
Query = ENSP00000362825 (Len=127)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000362825, Len=127):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MILISAGCPGGLWPIVVLVGLFIWICFAVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVY 80
WD40-rpts (______________WD 1_____________) (___________________WD 2________________
Query 81 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 127
WD40-rpts __) (_________________WD 3________________)
3 WD40-repeats found in QUERY=ENSP00000362825 (Len=127):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-33 5.05 323.46 0.00272 12.5% 39.93
WD 2: Seg 5 41-83 8.55 467.88 3.1e-05 32.5% 53.25
WD 3: Seg 9 87-125 9.69 514.93 7.1e-06 27.5% 52.61
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-33 --MILISAGCP----GGLWPIVVLVGLFIWI----CFAVRVWD
WD 2 41-83 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD
WD 3 87-125 RRILYKLPGHA----GSINEVAFHPDEPIIISASSDKRLYMGE
WD40 Template GECLRTLSGHT----SGVTSVSFSPDGKRLVSGSEDGTIKVWD