Input parameters:
Query = ENSP00000362770 (Len=369)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000362770, Len=369):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKLKSLLLRYYPPGIMLEYEKHGELKTKSIDLLDLGPSTDVSALVEEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNH 80
WD40-rpts (_________________WD 1________________)
Query 81 TFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
WD40-rpts (_________________WD 2________________) (_________________WD 3_______________
Query 161 LWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFD 240
WD40-rpts __) (_________________WD 4________________) (_________________WD 5__________
Query 241 HTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
WD40-rpts ______) (_________________WD 6________________) (_________________WD 7______
Query 321 ASADDGVSLCRPGWSAVARSWLTATCASQVQAILLPQPPELCHVLGNHV 369
WD40-rpts __________)
7 WD40-repeats found in QUERY=ENSP00000362770 (Len=369):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 28-66 7.19 411.50 0.00018 17.5% 44.90
WD 2: Seg 8 82-120 9.37 501.83 1.1e-05 30.0% 54.08
WD 3: Seg 12 124-163 9.49 506.48 9.3e-06 42.5% 54.57
WD 4: Seg 16 167-205 10.65 554.47 2.1e-06 40.0% 54.40
WD 5: Seg 20 209-247 10.71 557.06 1.9e-06 45.0% 52.43
WD 6: Seg 24 251-289 10.15 534.05 3.9e-06 37.5% 55.07
WD 7: Seg 28 293-331 9.65 513.14 7.5e-06 27.5% 55.81
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 28-66 KSIDLLDLGPSTDVSALVEEI-QKAEPLLTASRTEQVKLL-
WD 2 82-120 -FYLFKVLKAHILPLTNVALN-KSGSCFITGSYDRTCKLWD
WD 3 124-163 -GEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS
WD 4 167-205 -GKCYHTFRGHTAEIVCLSFN-PQSTLVATGSMDTTAKLWD
WD 5 209-247 -GEEVYTLRGHSAEIISLSFN-TSGDRIITGSFDHTVVVWD
WD 6 251-289 -GRKVNILIGHCAEISSASFN-WDCSLILTGSMDKTCKLWD
WD 7 293-331 -GKCVATLTGHDDEILDSCFD-YTGKLIATASADDGVSLCR
WD40 Template TGECLRTLSGHTSGVTSVSFS-PDGKRLVSGSEDGTIKVWD