Input parameters:
Query = ENSP00000362688 (Len=325)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000362688, Len=325):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWD 80
WD40-rpts (________________WD 1________________) (_________________WD 2________________)
Query 81 CETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGEC 160
WD40-rpts (___________________WD 3__________________) (_________________WD 4___
Query 161 IIAGHESGELNQYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPN 240
WD40-rpts _____________) (_________________WD 5________________) (________________WD 6
Query 241 YDHVVLGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDPQYFE 320
WD40-rpts ________________) (_________________WD 7________________)
Query 321 FEFEA 325
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000362688 (Len=325):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-38 8.71 474.44 2.5e-05 25.0% 52.08
WD 2: Seg 5 42-80 10.24 537.47 3.5e-06 40.0% 53.90
WD 3: Seg 9 84-126 5.63 347.17 0.00130 20.0% 56.20
WD 4: Seg 13 136-174 8.46 464.02 3.5e-05 22.5% 54.99
WD 5: Seg 17 178-216 9.62 511.97 7.8e-06 30.0% 56.25
WD 6: Seg 21 220-257 6.78 394.70 0.00030 22.5% 52.26
WD 7: Seg 26 275-313 9.93 524.98 5.2e-06 37.5% 54.91
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-38 MKPIL--LQGHERSITQIKYNREGDLLFTVAKD-----PIVNVWY
WD 2 42-80 -GERLGTYMGHTGAVWCVDADWDTKHVLTGSAD-----NSCRLWD
WD 3 84-126 -GKQLALLKTN-SAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFD
WD 4 136-174 -NEPYMKIPCNDSKITSAVWGPLGECIIAGHES-----GELNQYS
WD 5 178-216 -GEVLVNVKEHSRQINDIQLSRDMTMFVTASKD-----NTAKLFD
WD 6 220-257 -LEHQKTFRTERP-VNSAALSPNYDHVVLGGGQ-----EAMDVTT
WD 7 275-313 -EEEFGRVKGHFGPINSVAFHPDGKSYSSGGED-----GYVRIHY
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSED-----GTIKVWD