Input parameters:
Query = ENSP00000362677 (Len=314)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000362677, Len=314):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MNSGVPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFAS 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2______
Query 81 ASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVN 160
WD40-rpts __________) (_________________WD 3________________) (_________________WD 4__
Query 161 CLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIA 240
WD40-rpts ______________) (________________WD 5________________) (_________________
Query 241 FSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRRQISRTSKSPRDPQT 314
WD40-rpts WD 6________________) (_________________WD 7________________)
7 WD40-repeats found in QUERY=ENSP00000362677 (Len=314):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 10-49 9.86 522.16 5.7e-06 37.5% 54.23
WD 2: Seg 5 53-91 10.58 551.55 2.3e-06 45.0% 59.21
WD 3: Seg 9 95-133 10.92 565.64 1.5e-06 47.5% 57.60
WD 4: Seg 13 137-175 10.53 549.62 2.4e-06 42.5% 56.83
WD 5: Seg 17 182-219 8.32 458.24 4.1e-05 32.5% 48.60
WD 6: Seg 21 223-261 10.08 531.16 4.3e-06 40.0% 57.45
WD 7: Seg 25 265-303 10.01 528.18 4.7e-06 42.5% 54.64
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 10-49 AVRRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWE
WD 2 53-91 -GQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWD
WD 3 95-133 -AKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWD
WD 4 137-175 -GQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWD
WD 5 182-219 -AVSHQALEGHSANISCLCYSASG-LLASGSWDKTIHIWK
WD 6 223-261 -SSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD
WD 7 265-303 -GKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRRQIS
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD