Input parameters:
Query = ENSP00000362625 (Len=428)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000362625, Len=428):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPNRHEIRRRQARLQKEL 80
WD40-rpts
Query 81 AEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGS 160
WD40-rpts (__________________WD 1__________________) (_____________WD 2_____
Query 161 GKEVRVPATALCVFDAHDGEVNAVQFSPGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD 240
WD40-rpts _______) (_________________WD 3_________________) (_________________WD 4
Query 241 NARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPE 320
WD40-rpts ________________) (_______________WD 5_______________) (________________WD 6
Query 321 RTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSS 400
WD40-rpts ________________) (___________________WD 7__________________) (_____________
Query 401 INAVAWSPSGSHVVSVDKGCKAVLWAQY 428
WD40-rpts ____WD 8_________________)
8 WD40-repeats found in QUERY=ENSP00000362625 (Len=428):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 85-126 3.89 275.27 0.01209 10.0% -1.11
WD 2: Seg 3 138-168 3.22 247.82 0.02811 15.0% 26.97
WD 3: Seg 7 176-215 9.65 513.19 7.5e-06 22.5% 50.84
WD 4: Seg 11 219-257 10.61 552.79 2.2e-06 45.0% 55.98
WD 5: Seg 15 261-296 6.83 396.82 0.00028 22.5% 45.34
WD 6: Seg 19 300-337 7.46 422.70 0.00013 25.0% 54.12
WD 7: Seg 23 341-383 8.44 463.40 3.5e-05 35.0% 53.35
WD 8: Seg 27 387-426 8.41 462.18 3.7e-05 30.0% 49.22
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 85-126 ----KEPLP-VEQ----DDDIEVIVDETSDHTEETSPVRAISRAATKRLSQ
WD 2 138-168 --------I-FGR----RSVSSF------PVPQDNVDTHPGSGK-EVRVPA
WD 3 176-215 AHDGEVNAV-QFS----PGITSI------EFDSAGSYLLAASNDFASRIWT
WD 4 219-257 -YRLRHTLT-GHS----GKVLSA------KFLLDNARIVSGSHDRTLKLWD
WD 5 261-296 -KVCIKTVF-AGS----S---CN------DIVCTEQCVMSGHFDKKIRFWD
WD 6 300-337 -ESIVREME-LL-----GKITAL------DLNPERTELLSCSRDDLLKVID
WD 7 341-383 -NAIKQTFS-APGFKCGSDWTRV------VFSPDGSYVAAGSAEGSLYIWS
WD 8 387-426 -GKVEKVLSKQHS----SSINAV------AWSPSGSHVVSVDKGCKAVLWA
WD40 Template TGECLRTLS-GHT----SGVTSV------SFSPDGKRLVSGSEDGTIKVWD