Input parameters:
Query = ENSP00000360166 (Len=298)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000360166, Len=298):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MACIENVLGGHAPSPLVVSVDKNGNQELHHDMPLQCLSSKPEDDAEPWGQPQVPLRPSVNVLTDLDSKQLEWPSERTGSC 80
WD40-rpts (______________________WD 1_____________________)
Query 81 IPLHSLRAHRHPYGPPPAVAEESLATAEVNSSDALAGWRQEGQDAINVSWEVSGGPPALIVGGTKVNNGGTERGSNNARL 160
WD40-rpts
Query 161 HVALPQGKGFFPPRGPQVRGPSHIPTLRSGIVMEVPPGNTRIACRGKLAHVSFPLRGPCHPMHNWPRPIPLSSSTPGLPS 240
WD40-rpts
Query 241 CSTVHCFIPPRPPIFNPFLTMPLPFAPPPIFGPPLPSYFAHFHSGGMPAPASPNREHS 298
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000360166 (Len=298):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-49 3.01 238.91 0.03691 27.5% 5.75
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-49 MACIENVLGGHAPSPLVVSVDKNGNQELHHDMPLQCLSSKPEDDA-EPWG
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKR----------LVSGSEDGTIKVWD