Input parameters:

  Query = ENSP00000359628 (Len=852)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000359628, Len=852):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAPKQKKKTSRGKKRLKPVLAASEDMEPVNMESMGHPEIYPLVLTTKTQEIFNCRIDEDVTDEQPYKLINKEDIFEDLRN 80  
WD40-rpts                                                                                      

Query       81 RAAVSDFHPVKKIVQEYPGNELLLVYDKDFKYGLNFYLIATEEGKENYLNPPEVPEEQEEYKEHIPEDVYIYKPPVSKPW 160 
WD40-rpts                                                                                      

Query      161 VSLGSEKEIEEESVTESTKQITYMISRKRSEFGAPIKFSDQNASSVKDAYIECTAYPDKNFTLKQLEKDVGMQVIPQIKD 240 
WD40-rpts                                                                                      

Query      241 ISTQTKCVEIALQQNEIMNTFIDDWKYLAEEEGTFGDKTDTHLKEYQSFTDLHSPTEKMITCVSWHPTIYGLIAVSVAVR 320 
WD40-rpts                                                                                      

Query      321 LSFEDRVHFSGKLLLQPSLILFWSFSDPIHPQLMLESPDDIFCFKFCPSDPNIIAGGCINGQIVMWDITAHADRIENIKA 400 
WD40-rpts                              (___________________WD 1__________________)             

Query      401 GGSRSKRATLKPMFLLEPESNKEAMYIRHCAVSSIENGHKKVITDIHWLSDTFEINRMGSVFENRSGICCQLVTCSADCT 480 
WD40-rpts                                     (________________________WD 2____________________

Query      481 ICFWDIRPQKPLTPQTTEKKKEESIEIPFDVPSTFLHLDLSWKPLTKVRLSKGETSLDHCPTKISLNEDHLLCKTQDKML 560 
WD40-rpts      ____)                                                                           

Query      561 AQSKTEKAEEMNPYHNLESGMANLLKPIDDFCTKFFVGTEEGEVIYTDWKMEKDPETGRLMSKKPVSHHTIHDGTVHTIQ 640 
WD40-rpts                                                                    (_________________

Query      641 RSPFYNDIILTVGGWNVAIWKEGVMTGPLLQSCCAPKRYTSGHWSLTRPGVFYIGREDGYIDIWDLLEKTHEPAQSQNIC 720 
WD40-rpts      WD 3________________)(___________________WD 4___________________)(______________

Query      721 ITMITYIKPWIFSSKQQFIATADYYGTLHILEIPWTLSRPSTNEMASVNHYFEREVKHLEYVEQRKKIREQEKKEMELEM 800 
WD40-rpts      _______WD 5____________________)                                                

Query      801 AKKKVKTYQKSKEQMQAELKMDYESYLELEKTVLINLGLIKVTEKGSYMEVM 852 
WD40-rpts                                                          

5 WD40-repeats found in QUERY=ENSP00000359628 (Len=852):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   345-387      4.46  299.10  0.00579       20.0%     44.90
  WD 2:  Seg 16   432-485      4.25  290.40  0.00757       30.0%     42.98
  WD 3:  Seg 28   623-661      4.22  288.94  0.00792       12.5%     39.33
  WD 4:  Seg 31   662-705      4.22  289.08  0.00789       30.0%     53.31
  WD 5:  Seg 35   706-752      3.57  262.12  0.01813       12.5%     52.72

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  345-387    FS---D-------PIHPQLMLESPDDIFCFKFCPSDP-----------------NIIAGGCINGQIVMWD
   WD 2  432-485    -------------VS--SIENGHKKVITDIHWLS-DTFEINRMGSVFENRSGICCQLVTCSADCTICFWD
   WD 3  623-661    -K---K-------PV--SHHTIHDGTVHTIQRSP-FY-----------------NDIILTVGGWNVAIWK
   WD 4  662-705    EGVMTG-------PL--LQSCCAPKRYTSGHWSL-TR----------------PGVFYIGREDGYIDIWD
   WD 5  706-752    LL---EKTHEPAQSQ--NICITMITYIKPWIFSS-KQ-----------------QFIATADYYGTLHILE

   WD40 Template    TG---E-------CL--RTLSGHTSGVTSVSFSP-DG-----------------KRLVSGSEDGTIKVWD