Input parameters:
Query = ENSP00000358979 (Len=919)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000358979, Len=919):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECMEKFDKK 80
WD40-rpts
Query 81 RFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTA 160
WD40-rpts
Query 161 RVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL 240
WD40-rpts
Query 241 DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGL 320
WD40-rpts
Query 321 TCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSLMLENTECHSIYEESPERDTPVDAQRPIGSEILGQSSVSEK 400
WD40-rpts
Query 401 EPANGAQNPGPAKQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSI 480
WD40-rpts
Query 481 QKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHIPFLEESPC 560
WD40-rpts (________________WD 1_______________) (____________________WD 2___
Query 561 GSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVID 640
WD40-rpts ________________) (______________WD 3_____________)
Query 641 PSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGP 720
WD40-rpts (_________________WD 4________________)(_______________________WD 5___
Query 721 ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTG 800
WD40-rpts ____________________) (________________WD 6________________) (________
Query 801 SAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLP 880
WD40-rpts ________WD 7_______________) (_________________WD 8________________) (__
Query 881 IMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLWTYNG 919
WD40-rpts _______________WD 9________________)
9 WD40-repeats found in QUERY=ENSP00000358979 (Len=919):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 485-521 4.92 318.07 0.00322 15.0% 27.55
WD 2: Seg 7 533-577 5.79 353.72 0.00106 17.5% 19.43
WD 3: Seg 10 602-634 6.73 392.65 0.00032 25.0% 44.77
WD 4: Seg 13 651-689 7.79 436.40 8.2e-05 27.5% 52.50
WD 5: Seg 17 690-741 5.20 329.48 0.00226 20.0% 43.07
WD 6: Seg 20 745-782 8.70 474.22 2.5e-05 37.5% 51.97
WD 7: Seg 25 792-828 8.91 482.88 1.9e-05 35.0% 45.57
WD 8: Seg 28 832-870 9.66 513.67 7.4e-06 42.5% 57.31
WD 9: Seg 32 878-916 7.38 419.56 0.00014 17.5% 49.89
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 485-521 -------ELN-------IGMDGLGNEVSALNQ-----QCNGS-KGNGSNGSSVTSFT
WD 2 533-577 HDASNIHTST-------PRNPGSTNHIPFLEE-----SPCGSQISSEHSVIKPPLGD
WD 3 602-634 -------------------ILEDTQAVRAVAF-----HPAGGLYAVGSNSKTLRVCA
WD 4 651-689 -V-----VRF-------KRNKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
WD 5 690-741 FN-----AETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
WD 6 745-782 -G-----QGL-------HALSGHTGHILAL-Y-----TWSGWMIASGSQDKTVRFWD
WD 7 792-828 VG---------------TTFHGTGSAVASVAV-----DPSGRLLATGQEDSSCMLYD
WD 8 832-870 -G-----RMV-------QSYHPHSSDVRSVRF-----SPGAHYLLTGSYDMKIKVTD
WD 9 878-916 -Q-----LPI-------MVVGEHKDKVIQCRW-----HTQDLSFLSSSADRTVTLWT
WD40 Template TG-----ECL-------RTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD