Input parameters:
Query = ENSP00000358854 (Len=800)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000358854, Len=800):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGDGGTPKPTVAVSAAAPAGAAP 80
WD40-rpts
Query 81 VPAAAPDAGAPHDRQTLLAVLQFLRQSKLREAEEALRREAGLLEEAVAGSGAPGEVDSAGAEVTSALLSRVTASAPGPAA 160
WD40-rpts
Query 161 PDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF 240
WD40-rpts
Query 241 YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRH 320
WD40-rpts
Query 321 LQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKP 400
WD40-rpts
Query 401 KKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD 480
WD40-rpts (_________________WD
Query 481 DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLS 560
WD40-rpts 1________________)(_____________WD 2____________) (_________________WD 3______
Query 561 SSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
WD40-rpts __________) (_________________WD 4________________) (_________________WD 5__
Query 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS 720
WD40-rpts ______________) (_________________WD 6________________) (_________________WD
Query 721 RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ 800
WD40-rpts 7________________) (_________________WD 8________________)
8 WD40-repeats found in QUERY=ENSP00000358854 (Len=800):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 460-498 8.03 446.25 6.0e-05 27.5% 54.75
WD 2: Seg 9 499-529 4.60 304.57 0.00488 15.0% 40.89
WD 3: Seg 12 533-571 10.04 529.20 4.6e-06 45.0% 54.08
WD 4: Seg 16 575-613 8.96 484.79 1.8e-05 35.0% 52.94
WD 5: Seg 20 617-655 9.81 519.88 6.1e-06 32.5% 49.94
WD 6: Seg 24 659-697 10.68 555.92 2.0e-06 40.0% 54.90
WD 7: Seg 28 701-739 10.36 542.68 3.0e-06 47.5% 55.17
WD 8: Seg 32 743-781 3.55 261.23 0.01863 7.5% 43.15
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 460-498 SICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWS
WD 2 499-529 --------VTPKKLRSVKQASDLSLIDKESDDVLERIMD
WD 3 533-571 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS
WD 4 575-613 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
WD 5 617-655 YQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD
WD 6 659-697 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD
WD 7 701-739 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD
WD 8 743-781 AFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD