Input parameters:
Query = ENSP00000357858 (Len=328)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000357858, Len=328):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLK 80
WD40-rpts (__________________WD 1_________________) (________________WD 2______________
Query 81 MHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVL 160
WD40-rpts __)(__________________WD 3_________________) (________________WD 4_____________
Query 161 VWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 240
WD40-rpts __)(___________________WD 5___________________) (________________
Query 241 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYEMDDTEHPEDGIFIRQVTDAE 320
WD40-rpts _WD 6________________) (_________________WD 7________________)
Query 321 TKPKSPCT 328
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000357858 (Len=328):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-43 7.69 432.30 9.3e-05 25.0% 53.18
WD 2: Seg 5 46-83 6.57 386.23 0.00039 27.5% 55.00
WD 3: Seg 9 84-124 9.07 489.42 1.6e-05 27.5% 52.21
WD 4: Seg 13 127-163 5.05 323.24 0.00274 25.0% 47.49
WD 5: Seg 17 164-207 6.47 382.08 0.00044 17.5% 55.06
WD 6: Seg 21 224-262 7.58 427.76 0.00011 20.0% 42.25
WD 7: Seg 25 266-304 5.74 351.76 0.00113 20.0% 38.94
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-43 GS-NE----FKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYD
WD 2 46-83 -A-NS----MRLKYQHTGAVLDCAFY-D-PTHAWSGGLDHQLKMHD
WD 3 84-124 LNTDQ----ENLVGTHDAPIRCVEYCPE-VNVMVTGSWDQTVKLWD
WD 4 127-163 -T-PC----NAGTFSQPEKVYTL--SVS-GDRLIVGTAGRRVLVWD
WD 5 164-207 LR-NMGYVQQRRESSLKYQTRCIRAFPN-KQGYVLSSIEGRVAVEY
WD 6 224-262 -H-RL----KENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWD
WD 7 266-304 -K-KR----LCQFHRYPTSIASLAFSND-GTTLAIASSYMYEMDDT
WD40 Template TG-EC----LRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD