Input parameters:
Query = ENSP00000357852 (Len=145)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000357852, Len=145):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLK 80
WD40-rpts (__________________WD 1_________________) (________________WD 2______________
Query 81 MHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVHLIIL 145
WD40-rpts __)(__________________WD 3_________________)
3 WD40-repeats found in QUERY=ENSP00000357852 (Len=145):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-43 8.36 460.03 3.9e-05 25.0% 55.61
WD 2: Seg 5 46-83 6.92 400.46 0.00025 27.5% 54.69
WD 3: Seg 9 84-124 9.31 499.11 1.2e-05 27.5% 51.69
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-43 GS-NEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYD
WD 2 46-83 -A-NSMRLKYQHTGAVLDCAFY-D-PTHAWSGGLDHQLKMHD
WD 3 84-124 LNTDQENLVGTHDAPIRCVEYCPE-VNVMVTGSWDQTVKLWD
WD40 Template TG-ECLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD