Input parameters:
Query = ENSP00000357851 (Len=326)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000357851, Len=326):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTGSNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLK 80
WD40-rpts (__________________WD 1_________________) (________________WD 2______________
Query 81 MHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVL 160
WD40-rpts __)(__________________WD 3_________________) (________________WD 4_____________
Query 161 VWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENNIEQIYPVNAI 240
WD40-rpts __)(___________________WD 5___________________) (____________
Query 241 SFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYEMDDTEHPEDGIFIRQVTDAE 320
WD40-rpts ___WD 6______________) (_________________WD 7________________)
Query 321 TKPKST 326
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000357851 (Len=326):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 3-43 7.73 434.06 8.8e-05 25.0% 51.77
WD 2: Seg 5 46-83 6.61 387.58 0.00037 27.5% 55.20
WD 3: Seg 9 84-124 9.08 489.70 1.6e-05 27.5% 51.98
WD 4: Seg 13 127-163 5.09 325.06 0.00259 25.0% 47.18
WD 5: Seg 17 164-207 6.51 383.67 0.00042 17.5% 55.26
WD 6: Seg 22 228-262 7.78 436.18 8.2e-05 20.0% 37.68
WD 7: Seg 25 266-304 5.81 354.85 0.00103 20.0% 39.41
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 3-43 GS-NE----FKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYD
WD 2 46-83 -A-NS----MRLKYQHTGAVLDCAFY-D-PTHAWSGGLDHQLKMHD
WD 3 84-124 LNTDQ----ENLVGTHDAPIRCVEYCPE-VNVMVTGSWDQTVKLWD
WD 4 127-163 -T-PC----NAGTFSQPEKVYTL--SVS-GDRLIVGTAGRRVLVWD
WD 5 164-207 LR-NMGYVQQRRESSLKYQTRCIRAFPN-KQGYVLSSIEGRVAVEY
WD 6 228-262 ----------ENNIEQIYPVNAISFHNI-HNTFATGGSDGFVNIWD
WD 7 266-304 -K-KR----LCQFHRYPTSIASLAFSND-GTTLAIASSYMYEMDDT
WD40 Template TG-EC----LRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD