Input parameters:
Query = ENSP00000356815 (Len=695)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000356815, Len=695):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSRGGSYPHLLWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNP 80
WD40-rpts (_________________WD 1________________)
Query 81 YSRKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSC 160
WD40-rpts (__________________WD 2__________________)(____________________WD 3___________
Query 161 GEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATSVAICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGM 240
WD40-rpts _________)(______________________WD 4______________________)
Query 241 VARFIPSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSAEERREELRQPPVKRLRLRGDWSDTG 320
WD40-rpts (________________WD 5_______________) (__________________________WD 6___
Query 321 PRARPESERERDGEQSPNVSLMQRMSDMLSRWFEEASEVAQSNRGRGRSRPRGGTSQSDISTLPTVPSSPDLEVSETAME 400
WD40-rpts ______________________) (_________________WD 7________________)
Query 401 VDTPAEQFLQPSTSSTMSAQAHSTSSPTESPHSTPLLSSPDSEQRQSVEASGHHTHHQSDNNNEKLSPKPGTGEPVLSLH 480
WD40-rpts
Query 481 YSTEGTTTSTIKLNFTDEWSSIASSSRGIGSHCKSEGQEESFVPQSSVQPPEGDSETKAPEESSEDVTKYQEGVSAENPV 560
WD40-rpts
Query 561 ENHINITQSDKFTAKPLDSNSGERNDLNLDRSCGVPEESASSEKAKEPETSDQTSTESATNENNTNPEPQFQTEATGPSA 640
WD40-rpts
Query 641 HEETSTRDSALQDTDDSDDDPVLIPGARYRAGPGDRRSAVARIQEFFRRRKERKE 695
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000356815 (Len=695):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 41-79 8.95 484.52 1.8e-05 22.5% 45.45
WD 2: Seg 5 83-124 6.95 401.80 0.00024 37.5% 50.86
WD 3: Seg 9 125-170 6.19 370.19 0.00064 25.0% 45.03
WD 4: Seg 13 171-220 6.06 364.89 0.00075 25.0% 47.26
WD 5: Seg 17 245-281 7.48 423.45 0.00012 22.5% 40.64
WD 6: Seg 20 287-343 4.99 320.79 0.00295 17.5% 9.78
WD 7: Seg 23 346-384 3.89 275.16 0.01213 15.0% 4.30
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 41-79 -LKLEA---------T-----L-NVHDG------------------CVNTICWND--T-GEYILSGSDDTKLVISN
WD 2 83-124 -RKVLT---------T-----IRSGHRA------------------NIFSAKFLPCTN-DKQIVSCSGDGVIFYTN
WD 3 125-170 VEQDAE---------TNRQCQF-TCHYG------------------TTYEIMTVP-ND-PYTFLSCGEDGTVRWFD
WD 4 171-220 TRIKTSCTKEDCKDDI-----L-INCRR------------------AATSVAICP--PIPYYLAVGCSDSSVRIYD
WD 5 245-281 ---IPS---------H-----L-NNKSC------------------RVTSLCYSE--D-GQEILVSYSSDYIYLFD
WD 6 287-343 -ARELK---------T-----P-SAEERREELRQPPVKRLRLRGDWSDTGPRARP--E-SERERDGEQSPNVSLMQ
WD 7 346-384 -SDMLS---------R-----W-FEEAS------------------EVAQSNRGR--G-RSRPRGGTSQSDISTLP
WD40 Template TGECLR---------T-----L-SGHTS------------------GVTSVSFSP--D-GKRLVSGSEDGTIKVWD