Input parameters:
Query = ENSP00000356730 (Len=122)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000356730, Len=122):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MSAVCGGAARMLRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAGLRLFRSFDWNDGLFDVTWSENNE 80
WD40-rpts (_____________________WD 1_____________________) (_________________WD 2__
Query 81 HVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEYVQGSCVVK 122
WD40-rpts _______________)
2 WD40-repeats found in QUERY=ENSP00000356730 (Len=122):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-52 3.21 247.36 0.02851 27.5% 46.70
WD 2: Seg 5 57-96 5.79 353.99 0.00106 27.5% 55.44
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-52 CGGAARMLRTPGRHGYAAEFSPYLPGRLACATAQHYGIAGCGTLLILD
WD 2 57-96 -GLRLFRSFDWNDGLFDVTWSENNEHVLITCSGD-------GSLQLWD
WD40 Template TGECLRTLSGHTSGVTSVSFSP-DGKRLVSGSED-------GTIKVWD