Input parameters:

  Query = ENSP00000356641 (Len=731)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000356641, Len=731):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPVLVAPAVSGSGGG 80  
WD40-rpts                                                                                      

Query       81 AVSTGLSRHSCAARPSAGVGGSSSSLGSGSRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCI 160 
WD40-rpts                                                                                      

Query      161 HQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNL 240 
WD40-rpts                                                                                      

Query      241 MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSP 320 
WD40-rpts                                                                 (____________________

Query      321 SHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFT 400 
WD40-rpts      __WD 1______________________)     (________________________WD 2_________________

Query      401 RYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSS 480 
WD40-rpts      ______)   (_________________WD 3________________)     (____________________WD 4_

Query      481 YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCC 560 
WD40-rpts      __________________)   (_________________WD 5_________________)   (______________

Query      561 VKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHI 640 
WD40-rpts      ___WD 6________________)    (________________WD 7________________)(_____________

Query      641 NEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN 720 
WD40-rpts      _____WD 8__________________)   (__________________________WD 9__________________

Query      721 SQGTIKVLELV 731 
WD40-rpts      ________)  

9 WD40-repeats found in QUERY=ENSP00000356641 (Len=731):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   300-349      3.71  267.74  0.01525       22.5%     22.63
  WD 2:  Seg  4   355-407      5.12  325.95  0.00252       17.5%     29.44
  WD 3:  Seg  6   411-449      6.38  378.06  0.00050       22.5%     48.53
  WD 4:  Seg  9   455-499      6.10  366.76  0.00071       25.0%     43.26
  WD 5:  Seg 12   503-542      8.05  447.16  5.9e-05       35.0%     53.92
  WD 6:  Seg 16   546-584      5.76  352.44  0.00111       22.5%     54.68
  WD 7:  Seg 20   589-626      7.29  415.91  0.00015       27.5%     54.66
  WD 8:  Seg 24   627-668      8.28  456.57  4.4e-05       27.5%     56.43
  WD 9:  Seg 28   672-729      3.82  272.49  0.01317       27.5%     55.33

Multiple sequence alignment of 9 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  300-349    SGLYSPVSEDSTVPQ--FEAPSPSHS---------------SIIDSTEYS-Q----PPG---FSGSSQTKK---------------QPWY
   WD 2  355-407    --------------S--RRKRLTAHF---------------EDLEQCYFS-T----RMS-RISDDSRTASQLDEFQECLSKFTRYNSVRP
   WD 3  411-449    -L------------S--YASDLYNGS---------------SIVSSIEFD-R----DCD-YFAIAGVTKKI---------------KVYE
   WD 4  455-499    QD--------AVDIH--YPENEMTCN---------------SKISCISWS-S----YHKNLLASSDYEGTV---------------ILWD
   WD 5  503-542    -G------------Q--RSKVYQEHE---------------KRCWSVDFNLM----DPK-LLASGSDDAKV---------------KLWS
   WD 6  546-584    -D------------N--SVASIEAKA---------------N-VCCVKFS-P----SSRYHLAFGCADHCV---------------HYYD
   WD 7  589-626    -K------------Q--PIMVFKGHR---------------KAVSYAKFV------SGE-EIVSASTDSQL---------------KLWN
   WD 8  627-668    VG------------KPYCLRSFKGHI---------------NEKNFVGLA-S----NGD-YIACGSENNSL---------------YLYY
   WD 9  672-729    -S------------K--TLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR-ALPDGESN-VLIAANSQGTI---------------KVLE

   WD40 Template    TG------------E--CLRTLSGHT---------------SGVTSVSFS-P----DGK-RLVSGSEDGTI---------------KVWD