Input parameters:
Query = ENSP00000356451 (Len=1115)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000356451, Len=1115):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MRKFNIRKVLDGLTAGSSSASQQQQQQHPPGNREPEIQETLQSEHFQLCKTVRHGFPYQPSALAFDPVQKILAVGTQTGA 80
WD40-rpts (________________WD 1____________
Query 81 LRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALADDTLHLWNLRQKRPAILHSLKFCRERVTFCHLPFQSKWLYVG 160
WD40-rpts ____) (_________________WD 2________________) (_________________WD 3_______
Query 161 TERGNIHIVNVESFTLSGYVIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTYDEAI 240
WD40-rpts _________) (__________________WD 4__________________) (_____________
Query 241 HSVAWHHEGKQFICSHSDGTLTIWNVRSPAKPVQTITPHGKQLKDGKKPEPCKPILKVEFKTTRSGEPFIILSGGLSYDT 320
WD40-rpts ____WD 5________________)
Query 321 VGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDFQEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLSIHESPVT 400
WD40-rpts (_________________WD 6_________________)
Query 401 CCEYFADCPVDLIPALYSVGARQKRQGYSKKEWPINGGNWGLGAQSYPEIIITGHADGSVKFWDASAITLQVLYKLKTSK 480
WD40-rpts (____________________WD 7____________________)
Query 481 VFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVITEVIPMLEVRLLYEINDVETPEGE 560
WD40-rpts (____________________WD 8___________________)
Query 561 QPPPLPTPVGGSNPQPIPPQSHPSTSSSSSDGLRDNVPCLKVKNSPLKQSPGYQTELVIQLVWVGGEPPQQITSLAVNSS 640
WD40-rpts (______________WD
Query 641 YGLVVFGNCNGIAMVDYLQKAVLLNLGTIELYGSNDPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSAKMSR 720
WD40-rpts 9_____________)
Query 721 KLSLPTDLKPDLDVKDNSFSRSRSSSVTSIDKESREAISALHFCETFTRKTDSSPSPCLWVGTTLGTVLVIALNLPPGGE 800
WD40-rpts
Query 801 QRLLQPVIVSPSGTILRLKGAILRMAFLDTTGCLIPPAYEPWREHNVPEEKDEKEKLKKRRPVSVSPSSSQEISENQYAV 880
WD40-rpts
Query 881 ICSEKQAKVISLPTQNCAYKQNITETSFVLRGDIVALSNSICLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTF 960
WD40-rpts
Query 961 CFTNNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGESSSGKASRS 1040
WD40-rpts
Query 1041 LAQHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLGDLEERTAAMLSSAESFSKHAHEIMLKYKDKKWYQF 1115
WD40-rpts
9 WD40-repeats found in QUERY=ENSP00000356451 (Len=1115):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 48-85 6.02 363.21 0.00079 20.0% 43.65
WD 2: Seg 5 88-126 6.27 373.79 0.00057 22.5% 56.48
WD 3: Seg 9 132-170 5.80 354.29 0.00105 25.0% 55.30
WD 4: Seg 14 183-224 5.97 361.18 0.00084 30.0% 47.81
WD 5: Seg 17 227-265 6.68 390.42 0.00034 20.0% 54.22
WD 6: Seg 27 340-379 4.52 301.36 0.00539 7.5% 13.72
WD 7: Seg 33 419-464 5.65 347.93 0.00127 20.0% 39.43
WD 8: Seg 39 485-529 4.24 289.94 0.00768 7.5% 45.18
WD 9: Seg 45 624-656 3.07 241.30 0.03432 20.0% 44.72
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 48-85 --L------CKT-VRHGFPYQPSALAFDP-VQKILAVGTQTGALRLFG
WD 2 88-126 -GV------ECY-CQHDSGAAVIQLQFLI-NEGALVSALADDTLHLWN
WD 3 132-170 -PA------ILH-SLKFCRERVTFCHLPF-QSKWLYVGTERGNIHIVN
WD 4 183-224 WNK------AIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWD
WD 5 227-265 -SK------KAD-YRYTYDEAIHSVAWHH-EGKQFICSHSDGTLTIWN
WD 6 340-379 MDY------SIV-DFLTLCETPYPNDFQE-PYAVVVLLEKDLVLIDLA
WD 7 419-464 VGARQKRQGYSK-KEWPINGGNWGLGAQS-YPEIIITGHADGSVKFWD
WD 8 485-529 SRN-KDDRPNTD-IVDEDPYAIQIISWCP-ESRMLCIAGVSAHVIIYR
WD 9 624-656 VG-------------GEPPQQITSLAVNS-SYGLVVFGNCNG-IAMVD
WD40 Template TGE------CLR-TLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD