Input parameters:
Query = ENSP00000356064 (Len=1543)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000356064, Len=1543):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRG 80
WD40-rpts (________________WD 1_______________)(____________________
Query 81 HNSEVVLVRWNEPYQKLATCDADGGIFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHW 160
WD40-rpts ___WD 2______________________)(___________________WD 3__________________) (___
Query 161 SSEINLESQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGVLGMSWNYPIFLVEDSSESDTDSDDYAPP 240
WD40-rpts ______________WD 4________________) (_________________WD 5________________)
Query 241 QDGPAAYPIPVQNIKPLLTVSFTSGDISLMNNYDDLSPTVIRSGLKEVVAQWCTQGDLLAVAGMERQTQLGELPNGPLLK 320
WD40-rpts (__________________WD 6_________________)
Query 321 SAMVKFYNVRGEHIFTLDTLVQRPIISICWGHRDSRLLMASGPALYVVRVEHRVSSLQLLCQQAIASTLREDKDVSKLTL 400
WD40-rpts (__________________________WD 7_______
Query 401 PPRLCSYLSTAFIPTIKPPIPDPNNMRDFVSYPSAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL 480
WD40-rpts ___________________)
Query 481 RPEFVIMDPRTDSKPDEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRASKSPKLPRISIEARKSPKLPRAAQ 560
WD40-rpts
Query 561 ELSRSPRLPLRKPSVGSPSLTRREFPFEDITQHNYLAQVTSNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTI 640
WD40-rpts
Query 641 YLPEVRKISMDYINLPVFNPNVFSEDEDDLPVTGASGVPENSPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ 720
WD40-rpts
Query 721 LDVLTNQTTAVGTAEHAGDSATQYPVSNRYSNPGQVIFGSVEMGRIIQNPPPLSLPPPPQGPMQLSTVGHGDRDHEHLQK 800
WD40-rpts
Query 801 SAKALRPTPQLAAEGDAVVFSAPQEVQVTKINPPPPYPGTIPAAPTTAAPPPPLPPPQPPVDVCLKKGDFSLYPTSVHYQ 880
WD40-rpts
Query 881 TPLGYERITTFDSSGNVEEVCRPRTRMLCSQNTYTLPGPGSSATLRLTATEKKVPQPCSSATLNRLTVPRYSIPTGDPPP 960
WD40-rpts
Query 961 YPEIASQLAQGRGAAQRSDNSLIHATLRRNNREATLKMAQLADSPRAPLQPLAKSKGGPGGVVTQLPARPPPALYTCSQC 1040
WD40-rpts
Query 1041 SGTGPSSQPGASLAHTASASPLASQSSYSLLSPPDSARDRTDYVNSAFTEDEALSQHCQLEKPLRHPPLPEAAVTLKRPP 1120
WD40-rpts
Query 1121 PYQWDPMLGEDVWVPQERTAQTSGPNPLKLSSLMLSQGQHLDVSRLPFISPKSPASPTATFQTGYGMGVPYPGSYNNPPL 1200
WD40-rpts
Query 1201 PGVQAPCSPKDALSPTQFAQQEPAVVLQPLYPPSLSYCTLPPMYPGSSTCSSLQLPPVALHPWSSYSACPPMQNPQGTLP 1280
WD40-rpts
Query 1281 PKPHLVVEKPLVSPPPADLQSHLGTEVMVETADNFQEVLSLTESPVPQRTEKFGKKNRKRLDSRAEEGSVQAITEGKVKK 1360
WD40-rpts
Query 1361 EARTLSDFNSLISSPHLGREKKKVKSQKDQLKSKKLNKTNEFQDSSESEPELFISGDELMNQSQGSRKGWKSKRSPRAAG 1440
WD40-rpts
Query 1441 ELEEAKCRRASEKEDGRLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGSAYILD 1520
WD40-rpts
Query 1521 FQYPFSAVQAFAVALANVTQRLK 1543
WD40-rpts
7 WD40-repeats found in QUERY=ENSP00000356064 (Len=1543):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 23-59 3.04 240.41 0.03525 20.0% 37.29
WD 2: Seg 5 60-110 7.08 407.14 0.00020 35.0% 43.39
WD 3: Seg 8 111-153 5.61 346.49 0.00133 20.0% 56.56
WD 4: Seg 12 157-195 6.29 374.62 0.00056 22.5% 53.14
WD 5: Seg 16 199-237 4.88 316.16 0.00341 17.5% 29.66
WD 6: Seg 21 272-312 3.89 275.40 0.01204 10.0% 37.13
WD 7: Seg 29 363-420 3.21 247.15 0.02870 17.5% 13.16
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 23-59 KGR---VPK-------------SEKEK------------------PVCRRRYYEEG-WLATGNGRGVVGVTF
WD 2 60-110 TSS---HCRRDRSTPQRINFNLRGHNS------------------EVVLVRWNEPYQKLATCDADGGIFVWI
WD 3 111-153 QYEGRWSVE-----------LVNDRGA------------------QVSDFTWSHDGTQALISYRDGFVLVGS
WD 4 157-195 -QR---HWS-----------SEINLES------------------QITCGIWTPDDQQVLFGTADGQVIVMD
WD 5 199-237 -RM---LAH-----------VLLHESD------------------GVLGMSWNYPIFLVEDSSESDTDSDDY
WD 6 272-312 NYD---DLS----------PTVIRSGL------------------KEVVAQWCTQGDLLAVAGMERQTQLGE
WD 7 363-420 PAL---YVV-----------RVEHRVSSLQLLCQQAIASTLREDKDVSKLTLPPRLCSYLSTAFIPTIKPPI
WD40 Template TGE---CLR-----------TLSGHTS------------------GVTSVSFSPDGKRLVSGSEDGTIKVWD