Input parameters:
Query = ENSP00000355148 (Len=426)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000355148, Len=426):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MASPPRCSPTAHDRECKLPPPSAPASEYCPGKLSWGTMARALGRFKLSIPHTHLLATLDPLALDREPPPHLLPEKHQVPE 80
WD40-rpts (____________________WD 1________________
Query 81 KLIWGDQDPLSKIPFKILSGHEHAVSTCHFCVDDTKLLSGSYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRV 160
WD40-rpts ____) (_________________WD 2________________) (_________________WD 3_____
Query 161 IAASYDKTVRAWDLETGKLLWKVRYDTFIVSCKFSPDGKYVVSGFDVDHGICIMDAENITTVSVIKDHHTRSITSCCFDP 240
WD40-rpts ____________) (_________________WD 4________________)(___________________WD 5_
Query 241 DSQRVASVSLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHTGEFRNCGACVTLMQGH 320
WD40-rpts _________________) (_________________WD 6________________) (_________
Query 321 EGSVSSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLKGHNDWVMDVAISNNKKWILSASKDRTMRLWNIEEIDEIPL 400
WD40-rpts ________WD 7________________) (_________________WD 8________________)
Query 401 VIKYKKAVGLKLKQEKKEAYLKLKQG 426
WD40-rpts
8 WD40-repeats found in QUERY=ENSP00000355148 (Len=426):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 40-85 6.78 394.82 0.00030 12.5% 39.07
WD 2: Seg 5 92-130 9.85 521.38 5.8e-06 40.0% 50.90
WD 3: Seg 9 134-173 8.39 461.42 3.8e-05 27.5% 56.89
WD 4: Seg 13 177-215 7.00 403.97 0.00022 37.5% 54.70
WD 5: Seg 17 216-258 8.68 473.33 2.6e-05 37.5% 51.50
WD 6: Seg 21 263-301 8.51 466.26 3.2e-05 22.5% 51.34
WD 7: Seg 25 311-349 9.78 518.48 6.4e-06 37.5% 51.53
WD 8: Seg 29 353-391 9.66 513.73 7.4e-06 32.5% 56.38
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 40-85 RALGRFKLS---IPHTHLLAT-LDPLALDREPPPHLLPEK-HQVPEKLIWG
WD 2 92-130 -K------I---PFKILSGHE-HAVSTCHFCVDDTKLLSG-SYDCTVKLWD
WD 3 134-173 -G------S---VVRDFEHRPKAPVVECSITGDSSRVIAA-SYDKTVRAWD
WD 4 177-215 -G------K---LLWKV-RYD-TFIVSCKFSPDGKYVVSGFDVDHGICIMD
WD 5 216-258 AE------NITTVSVIKDHHT-RSITSCCFDPDSQRVASV-SLDRCIKIWD
WD 6 263-301 -A------T---LLTITKAHS-NAISNCCFTFSGHFLCTS-SWDKNLKIWN
WD 7 311-349 -G------A---CVTLMQGHE-GSVSSCHFARDSSFLISG-GFDRTVAIWD
WD 8 353-391 -G------Y---RKLSLKGHN-DWVMDVAISNNKKWILSA-SKDRTMRLWN
WD40 Template TG------E---CLRTLSGHT-SGVTSVSFSPDGKRLVSG-SEDGTIKVWD