Input parameters:
Query = ENSP00000355114 (Len=453)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000355114, Len=453):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MARKVVSRKRKAPASPGAGSDAQGPQFGWDHSLHKRKRLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLK 80
WD40-rpts (_
Query 81 EREFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQGCGIHAIELNPSRTLLATGGD 160
WD40-rpts _______________WD 1________________) (_________________WD 2_________
Query 161 NPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYAHITHKAL 240
WD40-rpts ________) (________________WD 3________________) (___
Query 241 KDIPKEDTNPDNCKVRALAFNNKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVS 320
WD40-rpts ________________WD 4___________________) (_________________WD 5_____________
Query 321 FLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGKGW 400
WD40-rpts ___) (_________________WD 6________________)(___________________WD 7__________
Query 401 LNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHGNYAGLWS 453
WD40-rpts ________)
7 WD40-repeats found in QUERY=ENSP00000355114 (Len=453):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 79-116 4.43 297.55 0.00607 17.5% 44.30
WD 2: Seg 5 130-169 6.06 364.90 0.00075 10.0% 38.01
WD 3: Seg 8 174-211 7.19 411.81 0.00018 27.5% 49.13
WD 4: Seg 13 237-280 7.75 434.76 8.6e-05 20.0% 42.28
WD 5: Seg 16 286-324 5.18 328.53 0.00232 10.0% 44.85
WD 6: Seg 20 328-366 4.99 320.66 0.00297 15.0% 49.97
WD 7: Seg 24 367-409 5.30 333.43 0.00200 15.0% 21.02
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 79-116 -LKE----REFHLGTLNKVFASQWL-NHRQVVCGTKC-NTLFVV----D
WD 2 130-169 -DRE----PGGVTQQGCGIHAIELNPSRTLLATGGDNPNSLAIY----R
WD 3 174-211 -DPV----CVGDDGHKDWIFSIAWISD-TMAVSGSRD-GSMGLW----E
WD 4 237-280 HKALKDIPKEDTNPDNCKVRALAFNNKNKELGAVSLD-GYFHLW----K
WD 5 286-324 -SKL----LSTKLPYCRENVCLAYGSEWSVYAVGSQA-HVSFLD----P
WD 6 328-366 -SYN----VKSVCSRERGSGIRSVSFYEHIITVGTGQ-GSLLFY----D
WD 7 367-409 -IRA----QRFLEERLSACYGSKPRLAGENLKLTTGK-GWLNHDETWRN
WD40 Template TGEC----LRTLSGHTSGVTSVSFSPDGKRLVSGSED-GTIKVW----D