Input parameters:

  Query = ENSP00000352820 (Len=476)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000352820, Len=476):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVKLIHTLADHGDDVNCCAFSFSLLATCSLDKTIRLYSLRDFTELPHSPLKFHTYAVHCCCFSPSGHILASCSTDGTTVL 80  
WD40-rpts      (________________WD 1________________)(___________________WD 2__________________

Query       81 WNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSC 160 
WD40-rpts      _)   (_________________WD 3_________________)   (_________________WD 4__________

Query      161 GDLTVWDDKMRCPHSEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCA 240 
WD40-rpts      ______)  (______________________WD 5_____________________)          (___________

Query      241 PVLACAFSHDGQMLVSGSVDKSVIVYDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFDLETLCQARR 320 
WD40-rpts      ______WD 6________________)   (_________________WD 7________________)(__________

Query      321 TEHQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELLNLTKESLADDLKIESLGLRSKVLRKIEELRTKVKSL 400 
WD40-rpts      ___________WD 8_____________________)                                           

Query      401 SSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLKMAINRWLETHQK 476 
WD40-rpts                                                                                  

8 WD40-repeats found in QUERY=ENSP00000352820 (Len=476):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-38       8.07  448.03  5.7e-05       27.5%     48.13
  WD 2:  Seg  5    39-82       8.90  482.40  2.0e-05       37.5%     47.50
  WD 3:  Seg  8    86-125      8.69  473.65  2.6e-05       37.5%     57.90
  WD 4:  Seg 12   129-167      9.43  504.29  9.9e-06       32.5%     54.02
  WD 5:  Seg 16   170-218      7.34  417.69  0.00015       30.0%     54.67
  WD 6:  Seg 20   229-267      9.65  513.43  7.5e-06       45.0%     46.99
  WD 7:  Seg 23   271-309     10.16  534.16  3.9e-06       37.5%     54.35
  WD 8:  Seg 27   310-357      5.75  352.31  0.00111       15.0%     54.31

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-38     MV---K----LIHTLADHG-DDVNCCAFS--F----------SLLATCSLD-----KTIRLYS
   WD 2   39-82     LR---DFTELPHSPLKFHT-YAVHCCCFSPSG----------HILASCSTD-----GTTVLWN
   WD 3   86-125    -G---Q----MLAVMEQPSGSPVRVCQFSPDS----------TCLASGAAD-----GTVVLWN
   WD 4  129-167    -Y---K----LYRCGSVKD-GSLAACAFSPNG----------SFFVTGSSC-----GDLTVWD
   WD 5  170-218    -M---R----CPHSEKAHD-LGITCCDFSSQPVSDGEQGLQFFRLASCGQD-----CQVKIWI
   WD 6  229-267    -L---K----YKSTLSGHC-APVLACAFSHDG----------QMLVSGSVD-----KSVIVYD
   WD 7  271-309    -E---N----ILHTLTQHT-RYVTTCAFAPNT----------LLLATGSMD-----KTVNIWQ
   WD 8  310-357    FDLETL----CQARRTEHQ-LKQFTEDWSEED----------VSTWLCAQDLKDLVGIFKMNN

   WD40 Template    TG---E----CLRTLSGHT-SGVTSVSFSPDG----------KRLVSGSED-----GTIKVWD