Input parameters:
Query = ENSP00000352667 (Len=186)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000352667, Len=186):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPKRGSGKVPWLKPGRSPLPSHARSQPGL 80
WD40-rpts (_____________________WD 1____________________)
Query 81 CNMYKDSHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNIVTPRTPPPSQGKGAEGQRPGFGYGGRASDYKSAHKGFKGV 160
WD40-rpts
Query 161 DAQGTLSKIFKLGGRDSRSGSPMARR 186
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000352667 (Len=186):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-47 2.82 231.05 0.04687 15.0% -4.54
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-47 MASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFG
WD40 Template TGECLRTLSGHTSGV--TSVS-----FSPDGKRLVSGSEDGTIKVWD