Input parameters:
Query = ENSP00000351635 (Len=395)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000351635, Len=395):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MCDQTFLVNVFGSCDKCFKQRALRPVFKKSQQLSYCSTCAEIMATEGLHENETLASLKSEAESLKGKLEEERAKLHDVEL 80
WD40-rpts (_________________WD 1________________)
Query 81 HQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC 160
WD40-rpts (_________________WD 2________________) (_________________WD 3__
Query 161 AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV 240
WD40-rpts ______________) (_________________WD 4________________) (_____________
Query 241 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS 320
WD40-rpts _____WD 5_________________) (_________________WD 6________________) (_______
Query 321 KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 395
WD40-rpts ___________WD 7_________________) (_________________WD 8________________)
8 WD40-repeats found in QUERY=ENSP00000351635 (Len=395):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 39-77 5.37 336.43 0.00182 17.5% 23.31
WD 2: Seg 4 95-133 10.09 531.49 4.3e-06 40.0% 52.64
WD 3: Seg 8 137-175 8.53 467.04 3.2e-05 15.0% 55.88
WD 4: Seg 12 185-223 8.96 484.89 1.8e-05 25.0% 53.33
WD 5: Seg 16 227-267 8.70 473.95 2.5e-05 35.0% 55.13
WD 6: Seg 20 271-309 10.25 538.18 3.5e-06 35.0% 52.73
WD 7: Seg 24 313-353 8.06 447.47 5.8e-05 37.5% 57.71
WD 8: Seg 28 357-395 9.81 519.77 6.1e-06 40.0% 50.26
Multiple sequence alignment of 8 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 39-77 CAEIMATEGLH--ENETLASLKSE--AESLKGKLEEE--RAKLHD
WD 2 95-133 MKTRRTLKGHG--NKVLCMDWCKD--KRRIVSSS--QDGKVIVWD
WD 3 137-175 TNKEHAVTMPC--TWVMACAYAPS--GCAIACGG--LDNKCSVYP
WD 4 185-223 AAKKKSVAMHT--NYLSACSFTNS--DMQILTAS--GDGTCALWD
WD 5 227-267 GQLLQSFHGHG--ADVLCLDLAPSETGNTFVSGG--CDKKAMVWD
WD 6 271-309 GQCVQAFETHE--SDINSVRYYPS--GDAFASGS--DDATCRLYD
WD 7 313-353 DREVAIYSKESIIFGASSVDFSLS--GRLLFAGY--NDYTINVWD
WD 8 357-395 GSRVSILFGHE--NRVSTLRVSPD--GTAFCSGS--WDHTLRVWA
WD40 Template GECLRTLSGHT--SGVTSVSFSPD--GKRLVSGS--EDGTIKVWD