Input parameters:
Query = ENSP00000350301 (Len=891)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000350301, Len=891):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRFRYIILKQKFLEALCVNNAMSAEDEPQ 80
WD40-rpts
Query 81 HLEFTMQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFK 160
WD40-rpts
Query 161 ASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIH 240
WD40-rpts
Query 241 VDKLLKPTKAAYADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANF 320
WD40-rpts
Query 321 HYPGVQNLSRSLMLENTECHSIYEESPERDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNELRDSTEQFQE 400
WD40-rpts
Query 401 YYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSIQKLGELNIGMDGLGNEVSALNQQCNGSK 480
WD40-rpts (______________WD 1__
Query 481 GNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGE 560
WD40-rpts ____________) (____________________WD 2___________________)
Query 561 EDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYCVA 640
WD40-rpts (______________WD 3_____________) (_________________
Query 641 WSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGL 720
WD40-rpts WD 4________________)(_______________________WD 5_______________________) (___
Query 721 HALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYD 800
WD40-rpts _____________WD 6________________) (________________WD 7_______________)
Query 801 IRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSA 880
WD40-rpts (_________________WD 8________________) (_________________WD 9_________
Query 881 DRTVTLWTYNG 891
WD40-rpts _______)
9 WD40-repeats found in QUERY=ENSP00000350301 (Len=891):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 5 460-493 4.59 304.25 0.00493 15.0% 30.46
WD 2: Seg 8 505-549 5.87 357.13 0.00096 17.5% 18.06
WD 3: Seg 11 574-606 6.82 396.46 0.00028 25.0% 46.68
WD 4: Seg 14 623-661 7.90 440.81 7.1e-05 27.5% 52.12
WD 5: Seg 18 662-713 5.27 332.16 0.00208 20.0% 43.72
WD 6: Seg 21 717-754 8.73 475.14 2.5e-05 37.5% 52.65
WD 7: Seg 26 764-800 8.95 484.39 1.8e-05 35.0% 46.14
WD 8: Seg 29 804-842 9.68 514.66 7.2e-06 42.5% 57.01
WD 9: Seg 33 850-888 7.49 423.92 0.00012 17.5% 50.74
Multiple sequence alignment of 9 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 460-493 IG-----------------MDGLGNEVSALNQ-----QCNGS-KGNGSNGSSVTSFT
WD 2 505-549 HDASNIHTST-------PRNPGSTNHIPFLEE-----SPCGSQISSEHSVIKPPLGD
WD 3 574-606 -------------------ILEDTQAVRAVAF-----HPAGGLYAVGSNSKTLRVCA
WD 4 623-661 -V-----VRF-------KRNKHHKGSIYCVAW-----SPCGQLLATGSNDKYVKVLP
WD 5 662-713 FN-----AETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTD
WD 6 717-754 -G-----QGL-------HALSGHTGHILAL-Y-----TWSGWMIASGSQDKTVRFWD
WD 7 764-800 VG---------------TTFHGTGSAVASVAV-----DPSGRLLATGQEDSSCMLYD
WD 8 804-842 -G-----RMV-------QSYHPHSSDVRSVRF-----SPGAHYLLTGSYDMKIKVTD
WD 9 850-888 -Q-----LPI-------MVVGEHKDKVIQCRW-----HTQDLSFLSSSADRTVTLWT
WD40 Template TG-----ECL-------RTLSGHTSGVTSVSF-----SPDGKRLVSGSEDGTIKVWD