Input parameters:
Query = ENSP00000347102 (Len=770)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000347102, Len=770):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MFPQSRHPTPHQAAGQPFKFTIPESLDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTE 80
WD40-rpts
Query 81 IAKRLNTICAQVIPFLSQEHQQQVAQAVERAKQVTMAELNAIIGQQQLQAQHLSHGHGPPVPLTPHPSGLQPPGIPPLGG 160
WD40-rpts
Query 161 SAGLLALSSALSGQSHLAIKDDKKHHDAEHHRGERPGKSNSLLVPDSLRGTDKRRNGPEFSNDIKKRKVDDKDSSHYDSD 240
WD40-rpts
Query 241 GDKSDDNLVVDVSNEDPSSPRASPAHSPRENGIDKNRLLKKDASSSPASTASSASSTSLKSKEMSLHEKASTPVLKSSTP 320
WD40-rpts
Query 321 TPRSDMPTPGTSATPGLRPGLGKPPAIDPLVNQAAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGAAYASLHNMSPQ 400
WD40-rpts
Query 401 MSAAAAAAAVVAYGRSPMVGFDPPPHMRVPTIPPNLAGIPGGKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINT 480
WD40-rpts (______________
Query 481 LNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 560
WD40-rpts ______WD 1____________________)(_____________________WD 2____________________)
Query 561 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 640
WD40-rpts (_________________WD 3________________) (_________________WD 4_____________
Query 641 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 720
WD40-rpts ___)(__________________WD 5_________________)(__________________WD 6____________
Query 721 LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 770
WD40-rpts _____) (_________________WD 7________________)
7 WD40-repeats found in QUERY=ENSP00000347102 (Len=770):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 7 466-511 6.03 363.61 0.00078 25.0% 50.13
WD 2: Seg 11 512-558 7.62 429.62 0.00010 25.0% 48.89
WD 3: Seg 14 564-602 8.69 473.44 2.6e-05 30.0% 55.40
WD 4: Seg 18 606-644 9.94 525.12 5.2e-06 35.0% 54.73
WD 5: Seg 22 645-685 7.13 409.21 0.00019 25.0% 52.11
WD 6: Seg 26 686-726 8.34 458.99 4.1e-05 30.0% 54.04
WD 7: Seg 30 729-767 7.68 431.80 9.4e-05 30.0% 52.60
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 466-511 LIG-------PGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD
WD 2 512-558 ISHPGNKSPVS-------QLDCL-NRDNYIRSCKLLPDGCTLIVGGEASTLSIWD
WD 3 564-602 -PR-------I-------KAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWD
WD 4 606-644 -QT-------L-------VRQFQ-GHTDGASCIDISNDGTKLWTGGLDNTVRSWD
WD 5 645-685 LRE-------G-------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH
WD 6 686-726 VNK------PD-------KYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWR
WD 7 729-767 -YG-------A-------SIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE
WD40 Template TGE-------C-------LRTLS-GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD