Input parameters:

  Query = ENSP00000344985 (Len=1314)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000344985, Len=1314):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKDNDKNMSTEDTKKNSDEKTDEEKITSFASANVSSDQWSLEDRHSLDSNTPLFPEDSSVGELSFKSENQEEFWHSNPSH 80  
WD40-rpts                                                                                      

Query       81 LSLDLSGIDSCEMSDSGSQVPDSLPSTPSPVESTKSFSVHSDRESSITNDMGFSDDFSLLESQERCEEELLQLLTHILNY 160 
WD40-rpts                                                                                      

Query      161 VMCKGLEKSDDDTWIERGQVFSALSKPGISSELLRPSDEIKLTLLQKMLEWAISENREAKTNPVTAENAFRLVLIIQDFL 240 
WD40-rpts                                                                                      

Query      241 QSEGLVNSNMWTEKLLEDMMLLFDCLSVCYSESPVWVKLSQIQIQLLLGFIGRGNLQVCAMASAKLNTLLQTKVIENQDE 320 
WD40-rpts                                                                                      

Query      321 ACYILGKLEHVLSQSIKEQTEIYSFLIPLVRTLVSKIYELLFMNLHLPSLPFTNGSSSFFEDFQEYCNSNEWQVYIEKYI 400 
WD40-rpts                                                                                      

Query      401 VPYMKQYEAHTFYDGHENMALYWKDCYEALMVNMHKRDREGGESKLKFQELFVEPFNRKARQENLRYNNMLKQLSSQQLA 480 
WD40-rpts                                                                                      

Query      481 TLRRWKAIQLYLTCERGPWAKRKQNPIHWKLANVENYSRMRLKLVPNYNFKTHEEASALRDNLGIQHSQPSSDTLLLEVV 560 
WD40-rpts                                                                                      

Query      561 KQVKVSDMVEDKLDLPEEDITARVNVDEKEEQDQKEKLVLMEDCELITIIDVIPGRLEITTQHIYFYDGSIEKEDGVGFD 640 
WD40-rpts                                                                                      

Query      641 FKWPHSQIREIHLRRYNLRRSALEIFHVDQSNYFLNFKKEVRNKIYSRLLSLHSPNSYYGSRSPQELFKASGLTQKWVNR 720 
WD40-rpts                                                                                      

Query      721 EISNFDYLIQINTMAGRTYNDLAQYPVFPWILQDYTSEELDLNNPAVFRDLSKPIGVVNEKNAKAMREKYENFEDPMGTI 800 
WD40-rpts                                                                                      

Query      801 DKFHYGTHYSNSAGVMHYLIRVEPFTTLHIQLQSGRFDCADRQFHSIPATWQALMDNPYDVKELIPEFFYFPEFLENQNQ 880 
WD40-rpts                                                                                      

Query      881 FNLGRLQISKELVNDVILPKWAKSAEDFIYKHRKALESEYVSAHLHEWIDLIFGYKQRGPAAVEALNVFYYCSYEGAVDL 960 
WD40-rpts                                                                                      

Query      961 DALTDEKERKALEGMINNFGQTPCQLLKITISMNYVIGTHGWLPYDRNISNYFTFIKDQTVTNPKTQRSINGSFAPGLEI 1040
WD40-rpts                                                                                      

Query     1041 TSKLFVVSHDAKLLFSAGYWDNSIQVMSLTKGKIISHIIRHMDIVTCLATDYCGIHLISGSRDTTCMIWQITQQGGVPVG 1120
WD40-rpts                                     (_________________WD 1________________)          

Query     1121 LASKPFQILYGHTNEVLSVGISTELDMAVSGSRDGTVIIHTIPNLAISWEGHIVVYSSTEEKTTLKDKNALHLFSINGKY 1200
WD40-rpts        (_________________WD 2________________)                                       

Query     1201 LGSQILKEQVSDICIIGEHIVTGSIQGFLSIRDLHSLNLSINPLAMRLPIHCVCVTKEYSHILVGLEDGKLIVVGVGKPA 1280
WD40-rpts                                          (_________________WD 3________________)     

Query     1281 EMRSGQLSRKFWGSSKRLSQISAGETEYNTQDSK 1314
WD40-rpts                                        

3 WD40-repeats found in QUERY=ENSP00000344985 (Len=1314):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13  1072-1110     5.71  350.71  0.00117       30.0%     55.29
  WD 2:  Seg 17  1123-1161     5.56  344.28  0.00143       37.5%     52.82
  WD 3:  Seg 28  1237-1275     3.24  248.30  0.02771       15.0%     47.39

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1072-1110   GKIISHIIRHMDIVTCLATDYCGIHLISGSRDTTCMIWQ
   WD 2 1123-1161   SKPFQILYGHTNEVLSVGISTELDMAVSGSRDGTVIIHT
   WD 3 1237-1275   LNLSINPLAMRLPIHCVCVTKEYSHILVGLEDGKLIVVG

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD