Input parameters:

  Query = ENSP00000344972 (Len=898)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000344972, Len=898):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVFSVRQCGHVGRTEEVLLTFKIFLVIICLHVVLVTSLEEDTDNSSLSPPPEVETTSLNDVTLSLLPSNETGVKPQRNIC 80  
WD40-rpts      (___________________________WD 1___________________________)                    

Query       81 NLSSICNDSAFFRGEIMFQYDKESTVPQNQHITNGTLTGVLSLSELKRSELNKTLQTLSETYFIMCATAEAQSTLNCTFT 160 
WD40-rpts                                                                                      

Query      161 IKLNNTMNACAVIAALERVKIRPMEHCCCSVRIPCPSSPEELEKLQCDLQDPIVCLADHPRGPPFSSSQSIPVVPRATVL 240 
WD40-rpts                                                                                      

Query      241 SQVPKATSFAEPPDYSPVTHNVPSPIGEIQPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTV 320 
WD40-rpts                                                                                      

Query      321 SAPANVNTTSAPPVQTDIVNTSSISDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLAPLAQRLLKVVDDI 400 
WD40-rpts                                                                                      

Query      401 GLQLNFSNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPANLQDELTVRCVFWDLGRNGGRGGWSDNGCSVKDRRLNET 480 
WD40-rpts                                                                                      

Query      481 ICTCSHLTSFGVLLDLSRTSVLPAQMMALTFITYIGCGLSSIFLSVTLVTYIAFEKIRRDYPSKILIQLCAALLLLNLVF 560 
WD40-rpts                                                                                      

Query      561 LLDSWIALYKMQGLCISVAVFLHYFLLVSFTWMGLEAFHMYLALVKVFNTYIRKYILKFCIVGWGVPAVVVTIILTISPD 640 
WD40-rpts                                                                                      

Query      641 NYGLGSYGKFPNGSPDDFCWINNNAVFYITVVGYFCVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLT 720 
WD40-rpts                                                                                      

Query      721 FLLGITWGFAFFAWGPVNVTFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQT 800 
WD40-rpts                                                                                      

Query      801 VNQGVSSSSNSLQSSSNSTNSTTLLVNNDCSVHASGNGNASTERNGVSFSVQNGDVCLHDFTGKQHMFNEKEDSCNGKGR 880 
WD40-rpts                                                                                      

Query      881 MALRRTSKRGSLHFIEQM 898 
WD40-rpts                        

1 WD40-repeats found in QUERY=ENSP00000344972 (Len=898):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-60       3.00  238.68  0.03717       22.5%     -0.49

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-60     MVFSVRQCGHVGRTEEVLLTFKIFLVIICLHVVLVTSLEEDTDNSSLSPPPEVETTSLND

   WD40 Template    TGECLRTLSGHTSG--------------------VTSVSFSPDGKRLVSGSEDGTIKVWD