Input parameters:

  Query = ENSP00000344562 (Len=542)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000344562, Len=542):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAAAAGAAAAPGSREPQDRPECGAGHPGPRYYRHPERWLLRPEAFLGPLRTRAPSAEDSQRERPAARSGPAMSRRVVRQS 80  
WD40-rpts                                                                                      

Query       81 KFRHVFGQAAKADQAYEDIRVSKVTWDSSFCAVNPKFLAIIVEAGGGGAFIVLPLAKTGRVDKNYPLVTGHTAPVLDIDW 160 
WD40-rpts                                                                   (_________________W

Query      161 CPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPIITLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLS 240 
WD40-rpts      D 1_________________)          (_________________WD 2_________________)   (_____

Query      241 LDDMHPDVIHSVCWNSNGSLLATTCKDKTLRIIDPRKGQVVAERFAAHEGMRPMRAVFTRQGHIFTTGFTRMSQRELGLW 320 
WD40-rpts      ____________WD 3_________________)(_____________________WD 4____________________

Query      321 DPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVS 400 
WD40-rpts      )(____________________WD 5___________________)                                  

Query      401 KCEIARFYKLHERKCEPIIMTVPRKSDLFQDDLYPDTPGPEPALEADEWLSGQDAEPVLISLRDGYVPPKHRELRVTKRN 480 
WD40-rpts                                                                                      

Query      481 ILDVRPPSGPRRSQSASDAPLSQHTLETLLEEIKALRERVQAQEQRITALENMLCELVDGTD 542 
WD40-rpts                                                                    

5 WD40-repeats found in QUERY=ENSP00000344562 (Len=542):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   142-181      7.15  410.14  0.00018       30.0%     42.92
  WD 2:  Seg  9   192-231      7.04  405.30  0.00021       32.5%     50.58
  WD 3:  Seg 13   235-274      7.51  424.99  0.00012       30.0%     55.63
  WD 4:  Seg 17   275-321      3.52  260.13  0.01927       15.0%     44.66
  WD 5:  Seg 21   322-366      4.60  304.81  0.00485       17.5%     42.06

Multiple sequence alignment of 5 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  142-181    -DK---NYPLVT----G-HTA-PVLDIDWCPHNDNV-I-ASA---SDDTTIMVWQ
   WD 2  192-231    -TE---PIITLE----G-HSK-RVGILSWHP-TARNVL-LSA---GGDNVIIIWN
   WD 3  235-274    -GE---VLLSLD----DMHPD-VIHSVCWNS-NGSL-L-ATT---CKDKTLRIID
   WD 4  275-321    PRKGQVVAERFA----A-HEGMRPMRAVFTR-QGHI-F-TTGFTRMSQRELGLWD
   WD 5  322-366    PNN---FEEPVALQEMD-TSN-GVLLPFYDP-DSSI-VYLCG---KGDSSIRYFE

   WD40 Template    TGE---CLRTLS----G-HTS-GVTSVSFSP-DGKR-L-VSG---SEDGTIKVWD