Input parameters:

  Query = ENSP00000342262 (Len=380)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000342262, Len=380):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEEIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGGFEGDHQLLCDIRHHGDVMDL 80  
WD40-rpts      (_____________________WD 1_____________________)(________________________WD 2___

Query       81 QFFDQERIVAASSTGCVTVFLHHPNNQTLSVNQQWTTAHYHTGPGSPSYSSAPCTGVVCNNPEIVTVGEDGRINLFRADH 160 
WD40-rpts      ____________________)                    (_______________WD 3_______________)   

Query      161 KEAVRTIDNADSSTLHAVTFLRTPEILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG 240 
WD40-rpts      (_________________WD 4________________)       (_________________WD 5____________

Query      241 MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPEHLFTCSEDGSLWHWDASTDVPEKSSLFHQGGRSSTFLSHSISNQA 320 
WD40-rpts      _____)(___________________WD 6___________________)   (________________WD 7______

Query      321 NVHQSVISSWLSTDPAKDRIEITSLLPSRSLSVNTLDVLGPCLVCGTDAEAIYVTRHLFS 380 
WD40-rpts      __________)(____________________WD 8___________________)    

8 WD40-repeats found in QUERY=ENSP00000342262 (Len=380):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-48       3.95  277.74  0.01120       17.5%     30.39
  WD 2:  Seg  5    49-101      5.01  321.78  0.00287       25.0%     53.10
  WD 3:  Seg 10   122-157      7.21  412.43  0.00017       22.5%     39.00
  WD 4:  Seg 13   161-199      6.44  380.89  0.00046       25.0%     53.74
  WD 5:  Seg 17   207-246      7.62  429.26  0.00010       22.5%     55.09
  WD 6:  Seg 21   247-290      7.79  436.52  8.1e-05       30.0%     51.95
  WD 7:  Seg 25   294-331      6.06  365.08  0.00075       15.0%     24.98
  WD 8:  Seg 27   332-376      5.27  332.47  0.00206       22.5%     43.99

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-48     ME-------E--------------IYAKF-VSQKISKTRWRPLPPGSLQ-TAET-FATGSWDNEENYISLWS
   WD 2   49-101    IG-------DFGNLDSDGGFEGDHQLLCD-IRHHGDVM-----DLQFFD-QE-R-IVAASST---GCVTVFL
   WD 3  122-157    TG-------P------------------G-SPSYSSAP-----CTGVVC-NNPE-IVTVGED---GRINLFR
   WD 4  161-199    -K-------E--------------AVRTIDNADSSTLH-----AVTFLR-TPE--ILTVNSI---GQLKIWD
   WD 5  207-246    -P-------S--------------QILSL-TGDRVPLH-----CVDRHP-NQQHVVATGGQD---GMLSIWD
   WD 6  247-290    VR-------Q-----------GTMPVSLL-KAHEAEMW-----EVHFHPSNPEH-LFTCSED---GSLWHWD
   WD 7  294-331    -D-------V--------------PEKSS-LFHQGGRS-----STFLSH-SISN-QANVH-Q---SVISSWL
   WD 8  332-376    STDPAKDRIE--------------ITSLL-PSRSLSVN-----T--LDV-LGPC-LVCGTDA---EAIYVTR

   WD40 Template    TG-------E--------------CLRTL-SGHTSGVT-----SVSFSP-DGKR-LVSGSED---GTIKVWD