Input parameters:
Query = ENSP00000341037 (Len=569)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000341037, Len=569):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKG 80
WD40-rpts (_____________WD 1________
Query 81 VRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPG 160
WD40-rpts _____) (__________________WD 2__________________) (________________WD
Query 161 SESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQ 240
WD40-rpts 3________________)(___________WD 4___________) (_________________WD 5_________
Query 241 DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVE 320
WD40-rpts _______) (_________________WD 6________________) (____________________WD 7__
Query 321 EGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTH 400
WD40-rpts __________________)(___________________WD 8__________________) (_________
Query 401 TNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKR 480
WD40-rpts _________WD 9_________________) (_________________WD10________________)______
Query 481 NHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGR 560
WD40-rpts _________WD11________________) (________________WD12_______________)
Query 561 PGKVVSFNP 569
WD40-rpts
12 WD40-repeats found in QUERY=ENSP00000341037 (Len=569):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 55-86 3.40 254.99 0.02257 17.5% 38.44
WD 2: Seg 6 90-131 6.09 366.26 0.00072 15.0% 54.74
WD 3: Seg 11 141-178 5.10 325.39 0.00256 17.5% 41.43
WD 4: Seg 14 179-206 3.71 267.75 0.01524 10.0% 35.98
WD 5: Seg 17 210-248 9.05 488.56 1.6e-05 30.0% 54.62
WD 6: Seg 21 252-290 9.87 522.25 5.7e-06 37.5% 55.89
WD 7: Seg 25 294-339 6.22 371.72 0.00061 22.5% 44.28
WD 8: Seg 29 340-382 6.75 393.32 0.00031 22.5% 51.81
WD 9: Seg 33 391-431 5.75 352.01 0.00112 12.5% 32.87
WD10: Seg 36 436-474 5.37 336.39 0.00182 10.0% 45.45
WD11: Seg 39 472-510 6.36 377.39 0.00051 17.5% 19.26
WD12: Seg 41 523-559 4.98 320.50 0.00298 22.5% 44.26
Multiple sequence alignment of 12 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 55-86 --------LNDQSG---NGDRLCFNV---GR--EL-YFY-------IYKGVRKAAD
WD 2 90-131 -P-IDKRIYKGTQPTCHDFNHLTATA--ESV--SL-LVG-------FSAGQVQLID
WD 3 141-178 ----FNEERLIDKS---RVTCVKWVP--GSE--SLFLVA-------HSSGNMYLYN
WD 4 179-206 -------------V---EHTCGTTAP--HYQ--LL-KQG-------ESFAVHTCKS
WD 5 210-248 -R-NPLLKWTVGEG---ALNEFAFSP--DGK--FL-ACV-------SQDGFLRVFN
WD 6 252-290 -V-ELHGTMKSYFG---GLLCVCWSP--DGK--YI-VTG-------GEDDLVTVWS
WD 7 294-339 -C-RVIARGHGHKS---WVSVVAFDP--YTT--SV-EEGDPMEFSGSDEDFQDLLH
WD 8 340-382 FGRDRANSTQSRLS---KRNSTDSRP--VSVTYRF-GSV-------GQDTQLCLWD
WD 9 391-431 -H-QPLSRARTHTN---VMNATSPPAGSNGN--SV-TTP-------GNSVPPPLPR
WD10 436-474 -P-HSAVSNAGSKS---SVMDGAIAS--GVS--KF-ATL-------SLHDRKERHH
WD11 472-510 -R-HHEKDHKRNHS---MGHISSKSS--DKL--NL-VTK-------TKTDPAKTLG
WD12 523-559 -L-EPLICKKIAHE---RLTVLIFLE--DC----I-VTA-------CQEGFICTWG
WD40 Template TG-ECLRTLSGHTS---GVTSVSFSP--DGK--RL-VSG-------SEDGTIKVWD