Input parameters:
Query = ENSP00000333873 (Len=191)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000333873, Len=191):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTS 80
WD40-rpts (______________________________________________________________________________W
Query 81 PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES 160
WD40-rpts D 1_____________________________________________________________________________
Query 161 DIDRDGTINLSEFQHVISRSPDFASSFKIVL 191
WD40-rpts )
1 WD40-repeats found in QUERY=ENSP00000333873 (Len=191):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-161 2.84 231.99 0.04555 30.0% -10.27
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-161 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESD
WD40 Template TGECLRTLS-----------GHT----------------SGVTS----VSFS---------PDGKRL------------------VS--------------GS---------------EDGTIK-------------------VW---------------D