Input parameters:

  Query = ENSP00000328671 (Len=412)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000328671, Len=412):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGSVGLALCGQTLVVRGGSRFLATSIASSDDDSLFIYDCSAAEKKSQENKGEDAPLDQGSGAILASTFSKSGSYFALTD 80  
WD40-rpts       (________________WD 1________________)           (_________________WD 2________

Query       81 DSKRLILFRTKPWQCLSVRTVARRCTALTFIASEEKVLVADKSGDVYSFSVLEPHGCGRLELGHLSMLLDVAVSPDDRFI 160 
WD40-rpts      ________)(__________________WD 3_________________)(___________________WD 4______

Query      161 LTADRDEKIRVSWAAAPHSIESFCLGHTEFVSRISVVPTQPGLLLSSSGDGTLRLWEYRSGRQLHCCHLASLQELVDPQA 240 
WD40-rpts      ____________)    (_________________WD 5_________________)           (___________

Query      241 PQKFAASRIAFWCQENCVALLCDGTPVVYIFQLDARRQQLVYRQQLAFQHQVWDVAFEETQGLWVLQDCQEAPLVLYRPV 320 
WD40-rpts      ________WD 6___________________)  (___________________WD 7___________________)  

Query      321 GDQWQSVPESTVLKKVSGVLRGNWAMLEGSAGADASFSSLYKATFDNVTSYLKKKEERLQQQLEKKQRRRSPPPGPDGHA 400 
WD40-rpts       (_________________WD 8_________________)                                       

Query      401 KKMRPGEATLSC 412 
WD40-rpts                  

8 WD40-repeats found in QUERY=ENSP00000328671 (Len=412):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-39       5.70  350.02  0.00119       20.0%     38.10
  WD 2:  Seg  5    51-89       7.20  412.20  0.00017       10.0%     44.32
  WD 3:  Seg  8    90-130      6.82  396.36  0.00028       10.0%     56.19
  WD 4:  Seg 12   131-173      8.56  468.31  3.0e-05       32.5%     45.98
  WD 5:  Seg 15   178-217      8.37  460.34  3.9e-05       32.5%     55.24
  WD 6:  Seg 20   229-272      5.59  345.56  0.00137        5.0%     39.77
  WD 7:  Seg 24   275-318      6.71  392.01  0.00032       10.0%     50.37
  WD 8:  Seg 27   322-361      5.25  331.72  0.00211       10.0%     33.92

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-39     AG---S---VGLALC---GQT--LVVRGGSR-FLATSI-ASSDDDSLFIYD
   WD 2   51-89     -K---G---EDAPLD---QGSGAILASTFSK-SGSYFA-LTDDSKRLILFR
   WD 3   90-130    TK---P--WQCLSVR---TVARRCTALTFIA-SEEKVL-VADKSGDVYSFS
   WD 4  131-173    VL---EPHGCGRLEL---GHLSMLLDVAVSP-DDRFIL-TADRDEKIRVSW
   WD 5  178-217    -H---S---IESFCL---GHTEFVSRISVVPTQPGLLL-SSSGDGTLRLWE
   WD 6  229-272    LASLQE---LVDPQA---PQKFAASRIAFWC-QENCVALLCDGTPVVYIFQ
   WD 7  275-318    AR---R---QQLVYRQQLAFQHQVWDVAFEETQGLWVL-QDCQEAPLVLYR
   WD 8  322-361    -D---Q---WQSVPE---STVLKKVSGVLRG-NWAMLEGSAGADASFSSLY

   WD40 Template    TG---E---CLRTLS---GHTSGVTSVSFSP-DGKRLV-SGSEDGTIKVWD