Input parameters:
Query = ENSP00000326531 (Len=341)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000326531, Len=341):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MERAVPLAVPLGQTEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALSSEAKEESKKPVVTFQAHDGPVY 80
WD40-rpts (_________________WD 1________________) (______________
Query 81 SMVSTDRHLLSAGDGEVKAWLWAEMLKKGCKELWRRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTF 160
WD40-rpts __WD 2________________) (_________________WD 3________________) (__
Query 161 TRVLRGHTDYIHCLALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA 240
WD40-rpts _______________WD 4________________) (____________________WD 5________________
Query 241 LTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKVLTAA 320
WD40-rpts ____) (_______________WD 6_______________) (___________________WD 7__________
Query 321 GNSCRVDVFTNLGYRAFSLSF 341
WD40-rpts _________)
7 WD40-repeats found in QUERY=ENSP00000326531 (Len=341):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 14-52 9.28 498.20 1.2e-05 30.0% 51.54
WD 2: Seg 6 66-103 6.67 390.11 0.00034 22.5% 51.47
WD 3: Seg 11 116-154 8.02 446.10 6.0e-05 12.5% 44.38
WD 4: Seg 14 158-196 10.25 538.24 3.5e-06 32.5% 55.37
WD 5: Seg 18 200-245 5.67 348.75 0.00124 15.0% 46.84
WD 6: Seg 22 249-284 4.88 316.21 0.00341 12.5% 53.49
WD 7: Seg 26 287-330 7.90 440.92 7.1e-05 25.0% 56.87
Multiple sequence alignment of 7 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 14-52 TEVFQALQRLHMTIFSQ--------SV-----SPCGKFLAAGNNYGQIAIFS
WD 2 66-103 KKPVVTFQAHDGPVYSM---------V-----STDRHLLSAGDGEVKAWLWA
WD 3 116-154 RQPPYRTSLEVPEINAL--------LL-----VPKENSLILAGGDCQLHTMD
WD 4 158-196 GTFTRVLRGHTDYIHCL--------AL-----RERSPEVLSGGEDGAVRLWD
WD 5 200-245 AKEVQTIEVYKHEECSRPHNGRWIGCL-----ATDSDWMVCGG-GPALTLWH
WD 6 249-284 STPTTIFPIRAP-QKHV--------TF-----YQD--LILSAGQGRCVNQWQ
WD 7 287-330 GELKAQVPGSSPGLLSL--------SLNQQPAAPECKVLTAAGNSCRVDVFT
WD40 Template GECLRTLSGHTSGVTSV--------SF-----SPDGKRLVSGSEDGTIKVWD