Input parameters:
Query = ENSP00000321761 (Len=340)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000321761, Len=340):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSADERLRSLWPRV 80
WD40-rpts
Query 81 ETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTY 160
WD40-rpts (________________________WD 1____________________
Query 161 KEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKVLGAW 240
WD40-rpts ___)
Query 241 RGTFGAWCSRGREPRGFGEEGFDREARVKLAKEGIGLKRRAWPEVGRAKIQGRSLRDALRHGRVSGRDLRERAWSFGKGR 320
WD40-rpts
Query 321 FWVVGAGPEVLISAGRWKSR 340
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000321761 (Len=340):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 6 112-164 2.82 231.00 0.04694 15.0% 15.90
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 112-164 AGAVAFSTEDHRPLRPRERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAP
WD40 Template TGECLRTLSGHTSGV-----------TSVSFSPDGKRLVS--GSEDGTIKVWD