Input parameters:

  Query = ENSP00000318944 (Len=670)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000318944, Len=670):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSSGKSARYNRFSGGPSNLPTPDVTTGTRMETTFGPAFSAVTTITKADGTSTYKQHCRTPSSSSTLAYSPRDEEDSMPPI 80  
WD40-rpts                                                                                      

Query       81 STPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEK 160 
WD40-rpts                                                                                      

Query      161 CPVDNVKLTVVVNNIAVAEQIGELFIHCRHGCRVAGSGKPPIFEVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCP 240 
WD40-rpts                                                                                      

Query      241 PLLRMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLG 320 
WD40-rpts                                                  (___________________________________

Query      321 KLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVW 400 
WD40-rpts      _______WD 1__________________________________________)           (______________

Query      401 CLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDN 480 
WD40-rpts      ___WD 2________________)    (________________WD 3_______________)   (___________

Query      481 PVCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGG 560 
WD40-rpts      ____WD 4_______________)     (_______________WD 5_______________)   (___________

Query      561 SVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLL 640 
WD40-rpts      _____WD 6_______________)   (__________________WD 7_________________)   (_______

Query      641 RHQGSVTALAVSRGRLFSGAVDSTVKVWTC 670 
WD40-rpts      _________WD 8_______________) 

8 WD40-repeats found in QUERY=ENSP00000318944 (Len=670):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   285-374      2.95  236.36  0.03989       10.0%     21.81
  WD 2:  Seg 14   386-424      8.19  452.94  4.9e-05       42.5%     50.51
  WD 3:  Seg 18   429-465      7.93  442.08  6.9e-05       42.5%     47.97
  WD 4:  Seg 22   469-504      5.39  337.49  0.00176       32.5%     47.50
  WD 5:  Seg 26   510-545      4.66  307.06  0.00452       30.0%     48.38
  WD 6:  Seg 30   549-585      6.34  376.69  0.00052       25.0%     52.60
  WD 7:  Seg 34   589-629      8.29  457.00  4.3e-05       35.0%     56.96
  WD 8:  Seg 38   633-669      7.70  432.88  9.1e-05       40.0%     50.70

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  285-374    EGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEF--RRDASMLNDELSHINARLNM
   WD 2  386-424    -FKCKGTFVGHQ--------------------------------------------------GPVWCLCV--YSMGDLLFSGSSDKTIKVWD
   WD 3  429-465    -YKCQKTLEGHD--------------------------------------------------GIV--LAL--CIQGCKLYSGSADCTIIVWD
   WD 4  469-504    -LQKVNTIRAHD--------------------------------------------------NPVCTLVS--SHN--VLFSGS-LKAIKVWD
   WD 5  510-545    -LKLKKELTGLN--------------------------------------------------HWVRALVA--A--QSYLYSGS-YQTIKIWD
   WD 6  549-585    -LDCIHVLQTSG--------------------------------------------------GSVYSIAV--T--NHHIVCGTYENLIHVWD
   WD 7  589-629    -KEQVRTLTGHV--------------------------------------------------GTVYALAVISTPDQTKVFSASYDRSLRVWS
   WD 8  633-669    -MICTQTLLRHQ--------------------------------------------------GSVTALAV--SRG--RLFSGAVDSTVKVWT

   WD40 Template    TGECLRTLSGHT--------------------------------------------------SGVTSVSF--SPDGKRLVSGSEDGTIKVWD