Input parameters:

  Query = ENSP00000318247 (Len=1301)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000318247, Len=1301):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVPEKNAVRILWGRERGARAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYIT 80  
WD40-rpts                                            (___________________WD 1__________________

Query       81 EVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEI 160 
WD40-rpts      )   (_________________WD 2_________________)  (________________WD 3_____________

Query      161 HFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLL 240 
WD40-rpts      ___)(___________________WD 4___________________)(______________WD 5_____________

Query      241 HNFLHMLSSRSSGIQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHREI 320 
WD40-rpts      _)(________________WD 6_______________)                                         

Query      321 APGLTGSEWTRTVLSLNSRSEAESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPASGLATESDGGNGSSQN 400 
WD40-rpts            (_________________WD 7________________)                                   

Query      401 NSGSIRHELQCDLRRFFLEYDRLQELDQSLSGEAPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRA 480 
WD40-rpts                                                                                      

Query      481 CHNLLTFNNDTLRWERTTPNYSSGEASSSWQVPSSFESVPSSGSQLPPLERTEGQTPSSSRLELSSSASPQEERTVGVAF 560 
WD40-rpts                                                                                      

Query      561 NQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRRSLALSPRLEYSGAILAHCKLRLPGSCHSPASASQVAGT 640 
WD40-rpts                                                                                      

Query      641 TGAHHHARLIFAFLVEMEFHHVSQAGLELLTSGDLPTSASQSAGITGVSHRAWPRLLESSLISLSRYDGAGSREHPIYPD 720 
WD40-rpts                                                                                      

Query      721 PARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMS 800 
WD40-rpts                                                                                      

Query      801 APSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISN 880 
WD40-rpts                                                                                      

Query      881 ASVNVLVQNCKIYNDASCDISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVM 960 
WD40-rpts                                                            (________________WD 8_____

Query      961 VGLASRRILLHPSTEHMVAQVFRLQQAHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAYGTNKGDLVICR 1040
WD40-rpts      ___________)                                                                    

Query     1041 PEALNSGVEYYWDQLNETVFTVHSNSRSSERPGTSRATWRTDRDMGLMNAIGLQPRNPATSVTSQGTQTLALQLQNAETQ 1120
WD40-rpts                                                                                      

Query     1121 TEREVPEPGTAASGPGEGEGSEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTE 1200
WD40-rpts                                                                                      

Query     1201 PGAAHTSSPQPSTSRGLLPEAGQLAERGLSPRTASWDQPGTPGREPTQPTLPSSSPVPIPVSLPSAEGPTLHCELTNNNH 1280
WD40-rpts                                                                                      

Query     1281 LLDGGSSRGDAAGPRGEPRNR 1301
WD40-rpts                           

8 WD40-repeats found in QUERY=ENSP00000318247 (Len=1301):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    39-81       6.11  367.07  0.00070       20.0%     50.29
  WD 2:  Seg  8    85-124      8.82  478.89  2.2e-05       35.0%     51.91
  WD 3:  Seg 12   127-164      6.01  363.05  0.00080       20.0%     49.90
  WD 4:  Seg 16   165-208      5.70  349.92  0.00120       17.5%     50.69
  WD 5:  Seg 20   209-242      3.22  247.58  0.02833       12.5%     16.09
  WD 6:  Seg 23   243-279      5.95  360.38  0.00087       20.0%     33.60
  WD 7:  Seg 27   327-365      2.90  234.65  0.04202       20.0%     10.63
  WD 8:  Seg 36   935-972      2.97  237.48  0.03856       30.0%     31.47

Multiple sequence alignment of 8 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   39-81     WMK-WEGKRVELPDSPRSTFLLAFSPD-RTLLASTHVNHNIYITE
   WD 2   85-124    -GK----CVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD
   WD 3  127-164    -GG----SESWFTDSNNAIASLAFHPT-AQLLLIATAN-EIHFWD
   WD 4  165-208    WSRREPFAVVKTASEMERVRLVRFDPL-GHYLLTAIVNPSNQQGD
   WD 5  209-242    ----------DEPEIPIDGTELSHYRQ-RALLQSQPVRRTPLLHN
   WD 6  243-279    -------FLHMLSSRSSGIQTEPFHPP-EQASSTQQDQGLLNRPS
   WD 7  327-365    -SE----WTRTVLSLNSRSEAESMPPP-RTSASSVSLLSVLRQQE
   WD 8  935-972    -GE----MLYTKRFGPNAI-SVSLSPM-GRYVMVGLASRRILLHP

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPD-GKRLVSGSEDGTIKVWD