Input parameters:
Query = ENSP00000314193 (Len=830)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000314193, Len=830):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MVEEENIRVVRCGGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNPNNHLQLYSCSLDG 80
WD40-rpts (_________________WD 1________________) (_________________WD 2____________
Query 81 TIKLWDYIDGILIKTFIVGCKLHALFTLAQAEDSVFVIVNKEKPDIFQLVSVKLPKSSSQEVEAKELSFVLDYINQSPKC 160
WD40-rpts _____) (__________________WD 3_________________) (________________
Query 161 IAFGNEGVYVAAVREFYLSVYFFKKKTTSRFTLSSSRNKKHAKNNFTCVACHPTEDCIASGHMDGKIRLWRNFYDDKKYT 240
WD40-rpts _WD 4________________) (________________WD 5________________) (__
Query 241 YTCLHWHHDMVMDLAFSVTGTSLLSGGRESVLVEWRDATEKNKEFLPRLGATIEHISVSPAGDLFCTSHSDNKIIIIHRN 320
WD40-rpts _______________WD 6________________) (_________________WD 7________________)
Query 321 LEASAVIQGLVKDRSIFTGLMIDPRTKALVLNGKPGHLQFYSLQSDKQLYNLDIIQQEYINDYGLIQIELTKAAFGCFGN 400
WD40-rpts (_________________WD 8________________) (_____________________WD
Query 401 WLATVEQRQEKETELELQMKLWMYNKKTQGFILNTKINMPHEDCITALCFCNAEKSEQPTLVTASKDGYFKVWILTDDSD 480
WD40-rpts 9____________________) (__________________WD10_________________)(_____
Query 481 IYKKAVGWTCDFVGSYHKYQATNCCFSEDGSLLAVSFEEIVTIWDSVTWELKCTFCQRAGKIRHLCFGRLTCSKYLLGAT 560
WD40-rpts __________________WD11______________________) (__________________WD12_________
Query 561 ENGILCCWNLLSCALEWNAKLNVRVMEPDPNSENIAAISQSSVGSDLFVFKPSEPRPLYIQKGISREKVQWGVFVPRDVP 640
WD40-rpts ________) (_________________WD13________________)(_________________WD14_______
Query 641 ESFTSEAYQWLNRSQFYFLTKSQSLLTFSTKSPEEKLTPTSKQLLAEESLPTTPFYFILGKHRQQQDEKLNETLENELVQ 720
WD40-rpts __________)
Query 721 LPLTENIPAISELLHTPAHVLPSAAFLCSMFVNSLLLSKETKSAKEIPEDVDMEEEKESEDSDEENDFTEKVQDTSNTGL 800
WD40-rpts
Query 801 GEDIIHQLSKSEEKELRKFRKIDYSWIAAL 830
WD40-rpts
14 WD40-repeats found in QUERY=ENSP00000314193 (Len=830):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 5-43 6.59 386.83 0.00038 22.5% 57.28
WD 2: Seg 5 47-86 8.96 484.66 1.8e-05 45.0% 58.91
WD 3: Seg 9 90-130 4.68 307.85 0.00441 12.5% 56.25
WD 4: Seg 14 144-182 6.68 390.74 0.00034 15.0% 54.19
WD 5: Seg 19 194-231 8.15 451.47 5.1e-05 25.0% 47.38
WD 6: Seg 22 238-276 8.21 453.75 4.8e-05 25.0% 50.56
WD 7: Seg 26 280-318 7.77 435.75 8.3e-05 17.5% 53.72
WD 8: Seg 30 324-362 7.85 438.93 7.6e-05 20.0% 51.55
WD 9: Seg 35 377-423 5.31 334.03 0.00196 17.5% 44.23
WD10: Seg 39 434-474 6.63 388.37 0.00036 27.5% 46.74
WD11: Seg 42 475-525 5.85 356.35 0.00098 30.0% 54.74
WD12: Seg 46 529-569 7.11 408.33 0.00020 20.0% 58.19
WD13: Seg 50 573-611 3.10 242.76 0.03282 7.5% 15.19
WD14: Seg 54 612-651 3.60 263.45 0.01740 17.5% 30.22
Multiple sequence alignment of 14 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 5-43 ENI------------RVVRC--GGSELNFRRAVFS--A----DSK-YIFCVSG--------D-FVKVYS
WD 2 47-86 -EE------------CVHIL--HGHRNLVTGIQLN--P----NNHLQLYSCSL--------DGTIKLWD
WD 3 90-130 -GI------------LIKTFIVGCKLHALFTLAQA--E----DSV-FVIVNKE--------KPDIFQLV
WD 4 144-182 AKE------------LSFVL--DYINQSPKCIAFG--N----EGV-YVAAVRE--------F-YLSVYF
WD 5 194-231 --S------------SSRNK--KHAKNNFTCVACH--P----TED-CIASGHM--------DGKIRLWR
WD 6 238-276 -KY------------TYTCL--HWHHDMVMDLAFS--V----TGT-SLLSGGR--------ESVLVEWR
WD 7 280-318 -EK------------NKEFL--PRLGATIEHISVS--P----AGD-LFCTSHS--------DNKIIIIH
WD 8 324-362 -SA------------VIQGL--VKDRSIFTGLMID--P----RTK-ALVLNGK--------PGHLQFYS
WD 9 377-423 -QE------------YINDY--GLIQIELTKAAFG--C----FGN-WLATVEQRQEKETELELQMKLWM
WD10 434-474 N---------------TKIN--MPHEDCITALCFC--NAEKSEQP-TLVTASK--------DGYFKVWI
WD11 475-525 LTDDSDIYKKAVGWTCDFVG--SYHKYQATNCCFS--E----DGS-LLAV-SF--------EEIVTIWD
WD12 529-569 -WE------------LKCTF--CQRAGKIRHLCFGRLT----CSK-YLLGATE--------NGILCCWN
WD13 573-611 -CA------------LEWNA--KLNVRVMEPDPNS--E----NIA-AISQSSV--------GSDLFVFK
WD14 612-651 PSE---------PRPLYIQK--GISREKVQWGVFV--P----RDV-PESFTSE--------A---YQWL
WD40 Template TGE------------CLRTL--SGHTSGVTSVSFS--P----DGK-RLVSGSE--------DGTIKVWD